Hb_009510_030

Information

Type -
Description -
Location Contig9510: 31397-35659
Sequence    

Annotation

kegg
ID rcu:RCOM_0339640
description 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase, putative (EC:3.1.4.11)
nr
ID XP_012087478.1
description PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
swissprot
ID Q39033
description Phosphoinositide phospholipase C 2 OS=Arabidopsis thaliana GN=PLC2 PE=1 SV=1
trembl
ID A0A067L8K5
description Phosphoinositide phospholipase C OS=Jatropha curcas GN=JCGZ_01271 PE=4 SV=1
Gene Ontology
ID GO:0004435
description phosphoinositide phospholipase c 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63429: 31289-36053 , PASA_asmbl_63430: 31627-34348
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009510_030 0.0 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
2 Hb_004126_010 0.051855319 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
3 Hb_002506_010 0.0629390334 - - choline transporter-related family protein [Populus trichocarpa]
4 Hb_026048_090 0.0647106954 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000771_140 0.0679364154 - - PREDICTED: abscisic acid receptor PYL8 [Jatropha curcas]
6 Hb_000057_060 0.0682867836 - - PREDICTED: uncharacterized protein LOC105634990 isoform X4 [Jatropha curcas]
7 Hb_003001_030 0.068574838 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
8 Hb_005730_020 0.0772234376 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.1-like [Jatropha curcas]
9 Hb_003404_030 0.0784689506 - - PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like isoform X1 [Jatropha curcas]
10 Hb_001017_090 0.0821462256 - - -
11 Hb_000264_190 0.0822942366 - - sphingolipid delta 4 desaturase/C-4 hydroxylase protein des2, putative [Ricinus communis]
12 Hb_002609_260 0.0856447682 - - CCCH-type zinc finger protein [Hevea brasiliensis]
13 Hb_010931_100 0.0882424561 - - PREDICTED: uncharacterized protein LOC105638669 [Jatropha curcas]
14 Hb_000387_080 0.0902744701 - - PREDICTED: protein IQ-DOMAIN 1 isoform X2 [Jatropha curcas]
15 Hb_005245_090 0.0934855238 - - PREDICTED: peroxisomal membrane protein 13 [Jatropha curcas]
16 Hb_005488_070 0.0948506352 - - putative cytochrome P450 [Oryza sativa Japonica Group]
17 Hb_005488_100 0.0948514716 - - hypothetical protein JCGZ_00295 [Jatropha curcas]
18 Hb_017134_040 0.0973839924 - - hypothetical protein AALP_AA3G042000 [Arabis alpina]
19 Hb_001433_170 0.0975245757 - - PREDICTED: topless-related protein 3 isoform X1 [Jatropha curcas]
20 Hb_127979_010 0.0976826125 - - PREDICTED: uncharacterized protein LOC105629383 [Jatropha curcas]

Gene co-expression network

sample Hb_009510_030 Hb_009510_030 Hb_004126_010 Hb_004126_010 Hb_009510_030--Hb_004126_010 Hb_002506_010 Hb_002506_010 Hb_009510_030--Hb_002506_010 Hb_026048_090 Hb_026048_090 Hb_009510_030--Hb_026048_090 Hb_000771_140 Hb_000771_140 Hb_009510_030--Hb_000771_140 Hb_000057_060 Hb_000057_060 Hb_009510_030--Hb_000057_060 Hb_003001_030 Hb_003001_030 Hb_009510_030--Hb_003001_030 Hb_014067_010 Hb_014067_010 Hb_004126_010--Hb_014067_010 Hb_004126_010--Hb_026048_090 Hb_004126_010--Hb_000057_060 Hb_004126_010--Hb_003001_030 Hb_004126_010--Hb_002506_010 Hb_003404_030 Hb_003404_030 Hb_002506_010--Hb_003404_030 Hb_002506_010--Hb_000057_060 Hb_001017_090 Hb_001017_090 Hb_002506_010--Hb_001017_090 Hb_010174_130 Hb_010174_130 Hb_002506_010--Hb_010174_130 Hb_000387_080 Hb_000387_080 Hb_002506_010--Hb_000387_080 Hb_127979_010 Hb_127979_010 Hb_026048_090--Hb_127979_010 Hb_026048_090--Hb_000771_140 Hb_026048_090--Hb_000057_060 Hb_001433_170 Hb_001433_170 Hb_026048_090--Hb_001433_170 Hb_000771_140--Hb_000057_060 Hb_005245_090 Hb_005245_090 Hb_000771_140--Hb_005245_090 Hb_000771_140--Hb_001433_170 Hb_000771_140--Hb_000387_080 Hb_000057_060--Hb_001433_170 Hb_000057_060--Hb_003404_030 Hb_000057_060--Hb_127979_010 Hb_114684_020 Hb_114684_020 Hb_003001_030--Hb_114684_020 Hb_005730_020 Hb_005730_020 Hb_003001_030--Hb_005730_020 Hb_002609_260 Hb_002609_260 Hb_003001_030--Hb_002609_260 Hb_000249_110 Hb_000249_110 Hb_003001_030--Hb_000249_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
358.175 35.0783 9.47715 33.2709 388.008 432.239
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
313.342 211.061 319.568 41.5745 9.40389

CAGE analysis