Hb_003404_030

Information

Type -
Description -
Location Contig3404: 26937-38296
Sequence    

Annotation

kegg
ID rcu:RCOM_0003390
description 1,2-diacylglycerol 3-beta-galactosyltransferase, putative
nr
ID XP_012081161.1
description PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like isoform X1 [Jatropha curcas]
swissprot
ID O82730
description Monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana GN=MGD2 PE=1 SV=1
trembl
ID A0A067K211
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17008 PE=4 SV=1
Gene Ontology
ID GO:0016758
description monogalactosyldiacylglycerol synthase chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35613: 27266-28927
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003404_030 0.0 - - PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like isoform X1 [Jatropha curcas]
2 Hb_000057_060 0.0696836151 - - PREDICTED: uncharacterized protein LOC105634990 isoform X4 [Jatropha curcas]
3 Hb_002506_010 0.0700286847 - - choline transporter-related family protein [Populus trichocarpa]
4 Hb_127979_010 0.0747919897 - - PREDICTED: uncharacterized protein LOC105629383 [Jatropha curcas]
5 Hb_009510_030 0.0784689506 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
6 Hb_176022_020 0.0824866452 - - cytochrome P450, putative [Ricinus communis]
7 Hb_010174_130 0.0838748677 - - PREDICTED: regulator of G-protein signaling 1 [Jatropha curcas]
8 Hb_002422_060 0.0891218447 desease resistance Gene Name: NB-ARC Disease resistance protein RGA2, putative [Ricinus communis]
9 Hb_004126_010 0.0915086117 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
10 Hb_000771_140 0.0929312007 - - PREDICTED: abscisic acid receptor PYL8 [Jatropha curcas]
11 Hb_000230_110 0.0932940944 - - PREDICTED: uncharacterized protein LOC105647634 [Jatropha curcas]
12 Hb_019613_020 0.0942460954 - - phospholipase C, putative [Ricinus communis]
13 Hb_026048_090 0.0965962258 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001433_170 0.0968171527 - - PREDICTED: topless-related protein 3 isoform X1 [Jatropha curcas]
15 Hb_002477_260 0.0987888206 - - PREDICTED: protein phosphatase 2C 16 [Jatropha curcas]
16 Hb_000258_430 0.099312122 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
17 Hb_000984_180 0.099334319 - - PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO3 isoform X1 [Jatropha curcas]
18 Hb_001001_160 0.1001369008 - - Phosphatidic acid phosphohydrolase 2 isoform 1 [Theobroma cacao]
19 Hb_026048_100 0.1002790363 - - PREDICTED: putative cell division cycle ATPase [Jatropha curcas]
20 Hb_011174_070 0.1003584071 - - PREDICTED: pentatricopeptide repeat-containing protein At5g06540-like [Jatropha curcas]

Gene co-expression network

sample Hb_003404_030 Hb_003404_030 Hb_000057_060 Hb_000057_060 Hb_003404_030--Hb_000057_060 Hb_002506_010 Hb_002506_010 Hb_003404_030--Hb_002506_010 Hb_127979_010 Hb_127979_010 Hb_003404_030--Hb_127979_010 Hb_009510_030 Hb_009510_030 Hb_003404_030--Hb_009510_030 Hb_176022_020 Hb_176022_020 Hb_003404_030--Hb_176022_020 Hb_010174_130 Hb_010174_130 Hb_003404_030--Hb_010174_130 Hb_001433_170 Hb_001433_170 Hb_000057_060--Hb_001433_170 Hb_000057_060--Hb_009510_030 Hb_000771_140 Hb_000771_140 Hb_000057_060--Hb_000771_140 Hb_000057_060--Hb_127979_010 Hb_000057_060--Hb_002506_010 Hb_002506_010--Hb_009510_030 Hb_001017_090 Hb_001017_090 Hb_002506_010--Hb_001017_090 Hb_002506_010--Hb_010174_130 Hb_000387_080 Hb_000387_080 Hb_002506_010--Hb_000387_080 Hb_000176_140 Hb_000176_140 Hb_127979_010--Hb_000176_140 Hb_127979_010--Hb_001433_170 Hb_002391_110 Hb_002391_110 Hb_127979_010--Hb_002391_110 Hb_026048_090 Hb_026048_090 Hb_127979_010--Hb_026048_090 Hb_004126_010 Hb_004126_010 Hb_009510_030--Hb_004126_010 Hb_009510_030--Hb_026048_090 Hb_009510_030--Hb_000771_140 Hb_003001_030 Hb_003001_030 Hb_009510_030--Hb_003001_030 Hb_019613_020 Hb_019613_020 Hb_176022_020--Hb_019613_020 Hb_012055_020 Hb_012055_020 Hb_176022_020--Hb_012055_020 Hb_000088_040 Hb_000088_040 Hb_176022_020--Hb_000088_040 Hb_040996_010 Hb_040996_010 Hb_176022_020--Hb_040996_010 Hb_000005_050 Hb_000005_050 Hb_176022_020--Hb_000005_050 Hb_001001_160 Hb_001001_160 Hb_010174_130--Hb_001001_160 Hb_000696_110 Hb_000696_110 Hb_010174_130--Hb_000696_110 Hb_000029_030 Hb_000029_030 Hb_010174_130--Hb_000029_030 Hb_000025_200 Hb_000025_200 Hb_010174_130--Hb_000025_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
149.228 22.2965 7.0776 25.8717 158.841 155.227
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
103.624 67.7869 134.539 21.7028 8.39369

CAGE analysis