Hb_000103_060

Information

Type -
Description -
Location Contig103: 42952-44054
Sequence    

Annotation

kegg
ID cit:102616833
description uncharacterized LOC102616833
nr
ID KDP40208.1
description hypothetical protein JCGZ_02206 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZ57
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02206 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01173: 44007-44213
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000103_060 0.0 - - hypothetical protein JCGZ_02206 [Jatropha curcas]
2 Hb_000617_050 0.1687281067 - - PREDICTED: uncharacterized protein LOC105647466 [Jatropha curcas]
3 Hb_169246_010 0.1690053237 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003579_020 0.1731138811 - - PREDICTED: probable protein phosphatase 2C 9 [Populus euphratica]
5 Hb_002811_230 0.1766530986 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-1 [Jatropha curcas]
6 Hb_003029_080 0.1802652514 - - peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
7 Hb_000122_040 0.1803792953 - - PREDICTED: uncharacterized protein LOC105649224 [Jatropha curcas]
8 Hb_016604_020 0.1822229952 - - -
9 Hb_007617_020 0.1908326446 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001616_020 0.1908666017 - - PREDICTED: wound-induced basic protein [Jatropha curcas]
11 Hb_005031_070 0.19462627 - - RecName: Full=Major latex allergen Hev b 5; AltName: Allergen=Hev b 5 [Hevea brasiliensis]
12 Hb_004005_010 0.1950119021 - - PREDICTED: uncharacterized protein LOC102623333 isoform X2 [Citrus sinensis]
13 Hb_001623_330 0.1950154921 - - PREDICTED: uncharacterized protein LOC105638463 [Jatropha curcas]
14 Hb_000853_360 0.196963006 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 5-like [Jatropha curcas]
15 Hb_009787_040 0.1988588184 desease resistance Gene Name: AAA_17 PREDICTED: uncharacterized protein LOC105135462 isoform X2 [Populus euphratica]
16 Hb_003992_080 0.2002679003 - - PREDICTED: protein LURP-one-related 5 [Jatropha curcas]
17 Hb_002374_490 0.2011572739 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004958_050 0.2012359855 - - hypothetical protein CICLE_v10032980mg [Citrus clementina]
19 Hb_002234_210 0.205740381 - - hypothetical protein POPTR_0012s13380g [Populus trichocarpa]
20 Hb_001085_090 0.2059750411 - - PREDICTED: uncharacterized protein LOC105634186 [Jatropha curcas]

Gene co-expression network

sample Hb_000103_060 Hb_000103_060 Hb_000617_050 Hb_000617_050 Hb_000103_060--Hb_000617_050 Hb_169246_010 Hb_169246_010 Hb_000103_060--Hb_169246_010 Hb_003579_020 Hb_003579_020 Hb_000103_060--Hb_003579_020 Hb_002811_230 Hb_002811_230 Hb_000103_060--Hb_002811_230 Hb_003029_080 Hb_003029_080 Hb_000103_060--Hb_003029_080 Hb_000122_040 Hb_000122_040 Hb_000103_060--Hb_000122_040 Hb_002876_360 Hb_002876_360 Hb_000617_050--Hb_002876_360 Hb_002326_180 Hb_002326_180 Hb_000617_050--Hb_002326_180 Hb_003638_080 Hb_003638_080 Hb_000617_050--Hb_003638_080 Hb_003216_100 Hb_003216_100 Hb_000617_050--Hb_003216_100 Hb_009252_130 Hb_009252_130 Hb_000617_050--Hb_009252_130 Hb_004005_010 Hb_004005_010 Hb_000617_050--Hb_004005_010 Hb_007617_020 Hb_007617_020 Hb_169246_010--Hb_007617_020 Hb_002374_490 Hb_002374_490 Hb_169246_010--Hb_002374_490 Hb_001623_330 Hb_001623_330 Hb_169246_010--Hb_001623_330 Hb_000866_300 Hb_000866_300 Hb_169246_010--Hb_000866_300 Hb_011805_080 Hb_011805_080 Hb_169246_010--Hb_011805_080 Hb_005031_070 Hb_005031_070 Hb_169246_010--Hb_005031_070 Hb_003579_020--Hb_000122_040 Hb_001214_140 Hb_001214_140 Hb_003579_020--Hb_001214_140 Hb_097007_010 Hb_097007_010 Hb_003579_020--Hb_097007_010 Hb_043623_010 Hb_043623_010 Hb_003579_020--Hb_043623_010 Hb_003579_020--Hb_004005_010 Hb_001159_140 Hb_001159_140 Hb_002811_230--Hb_001159_140 Hb_002811_230--Hb_007617_020 Hb_001946_210 Hb_001946_210 Hb_002811_230--Hb_001946_210 Hb_000189_270 Hb_000189_270 Hb_002811_230--Hb_000189_270 Hb_003641_020 Hb_003641_020 Hb_002811_230--Hb_003641_020 Hb_003992_240 Hb_003992_240 Hb_002811_230--Hb_003992_240 Hb_002498_180 Hb_002498_180 Hb_003029_080--Hb_002498_180 Hb_003029_080--Hb_001623_330 Hb_003058_070 Hb_003058_070 Hb_003029_080--Hb_003058_070 Hb_000483_160 Hb_000483_160 Hb_003029_080--Hb_000483_160 Hb_003001_060 Hb_003001_060 Hb_003029_080--Hb_003001_060 Hb_001821_120 Hb_001821_120 Hb_003029_080--Hb_001821_120 Hb_007943_140 Hb_007943_140 Hb_000122_040--Hb_007943_140 Hb_000438_220 Hb_000438_220 Hb_000122_040--Hb_000438_220 Hb_004109_020 Hb_004109_020 Hb_000122_040--Hb_004109_020 Hb_000122_040--Hb_001214_140 Hb_000122_040--Hb_003638_080 Hb_000699_040 Hb_000699_040 Hb_000122_040--Hb_000699_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.26778 4.11705 0.597126 0.507591 3.63869 2.82437
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.682 16.4685 2.42631 0.865806 0.167648

CAGE analysis