Hb_043623_010

Information

Type -
Description -
Location Contig43623: 11027-15071
Sequence    

Annotation

kegg
ID rcu:RCOM_1213600
description mitochondrial import inner membrane translocase subunit tim44, putative
nr
ID XP_012085319.1
description PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-2 [Jatropha curcas]
swissprot
ID Q5XF06
description Mitochondrial import inner membrane translocase subunit TIM44-2 OS=Arabidopsis thaliana GN=TIM44-2 PE=1 SV=1
trembl
ID A0A067JRL5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17690 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_043623_010 0.0 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-2 [Jatropha curcas]
2 Hb_002908_070 0.1169745891 - - DNA gyrase subunit A, chloroplast/mitochondrial precursor, putative [Ricinus communis]
3 Hb_000258_280 0.1373012825 - - PREDICTED: probable ran guanine nucleotide release factor [Jatropha curcas]
4 Hb_001449_090 0.1375504226 - - PREDICTED: NHL repeat-containing protein 2 isoform X2 [Jatropha curcas]
5 Hb_000203_020 0.1428265967 - - PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
6 Hb_002811_090 0.1442916042 - - 40S ribosomal protein S24A [Hevea brasiliensis]
7 Hb_000212_210 0.1450077762 - - unnamed protein product [Coffea canephora]
8 Hb_002909_130 0.1457672904 - - Uncharacterized protein isoform 1 [Theobroma cacao]
9 Hb_000289_070 0.1463442402 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000042_260 0.1476389849 - - PREDICTED: uncharacterized protein LOC105632814 [Jatropha curcas]
11 Hb_003057_020 0.1505725503 - - 40S ribosomal protein S23, putative [Ricinus communis]
12 Hb_009880_010 0.1536871281 - - PREDICTED: cytochrome c [Jatropha curcas]
13 Hb_002344_070 0.1541630413 - - PREDICTED: proteasome subunit alpha type-6 [Jatropha curcas]
14 Hb_000329_020 0.1565779928 - - cytoplasmic ribosomal protein S13 [Panax ginseng]
15 Hb_007497_030 0.1604942503 - - mutt domain protein, putative [Ricinus communis]
16 Hb_172221_010 0.1618412431 - - PREDICTED: 60S ribosomal protein L37-1 [Jatropha curcas]
17 Hb_003038_190 0.1619389035 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105645961 [Jatropha curcas]
18 Hb_000331_640 0.1639049778 transcription factor TF Family: TAZ protein binding protein, putative [Ricinus communis]
19 Hb_000788_010 0.1654025178 - - 40S ribosomal protein S16A [Hevea brasiliensis]
20 Hb_000878_020 0.1667125524 - - PREDICTED: uncharacterized protein LOC105629937 [Jatropha curcas]

Gene co-expression network

sample Hb_043623_010 Hb_043623_010 Hb_002908_070 Hb_002908_070 Hb_043623_010--Hb_002908_070 Hb_000258_280 Hb_000258_280 Hb_043623_010--Hb_000258_280 Hb_001449_090 Hb_001449_090 Hb_043623_010--Hb_001449_090 Hb_000203_020 Hb_000203_020 Hb_043623_010--Hb_000203_020 Hb_002811_090 Hb_002811_090 Hb_043623_010--Hb_002811_090 Hb_000212_210 Hb_000212_210 Hb_043623_010--Hb_000212_210 Hb_000622_080 Hb_000622_080 Hb_002908_070--Hb_000622_080 Hb_000289_070 Hb_000289_070 Hb_002908_070--Hb_000289_070 Hb_001449_100 Hb_001449_100 Hb_002908_070--Hb_001449_100 Hb_001266_030 Hb_001266_030 Hb_002908_070--Hb_001266_030 Hb_009880_010 Hb_009880_010 Hb_002908_070--Hb_009880_010 Hb_002344_070 Hb_002344_070 Hb_000258_280--Hb_002344_070 Hb_003549_020 Hb_003549_020 Hb_000258_280--Hb_003549_020 Hb_007497_030 Hb_007497_030 Hb_000258_280--Hb_007497_030 Hb_001386_050 Hb_001386_050 Hb_000258_280--Hb_001386_050 Hb_000878_020 Hb_000878_020 Hb_000258_280--Hb_000878_020 Hb_004735_050 Hb_004735_050 Hb_000258_280--Hb_004735_050 Hb_001307_210 Hb_001307_210 Hb_001449_090--Hb_001307_210 Hb_001225_010 Hb_001225_010 Hb_001449_090--Hb_001225_010 Hb_002909_130 Hb_002909_130 Hb_001449_090--Hb_002909_130 Hb_012395_130 Hb_012395_130 Hb_001449_090--Hb_012395_130 Hb_011377_020 Hb_011377_020 Hb_001449_090--Hb_011377_020 Hb_001449_090--Hb_000878_020 Hb_000915_120 Hb_000915_120 Hb_000203_020--Hb_000915_120 Hb_012251_010 Hb_012251_010 Hb_000203_020--Hb_012251_010 Hb_007120_090 Hb_007120_090 Hb_000203_020--Hb_007120_090 Hb_000042_260 Hb_000042_260 Hb_000203_020--Hb_000042_260 Hb_000045_250 Hb_000045_250 Hb_000203_020--Hb_000045_250 Hb_002006_130 Hb_002006_130 Hb_000203_020--Hb_002006_130 Hb_003057_020 Hb_003057_020 Hb_002811_090--Hb_003057_020 Hb_002811_090--Hb_000212_210 Hb_002811_090--Hb_007120_090 Hb_027472_160 Hb_027472_160 Hb_002811_090--Hb_027472_160 Hb_001789_050 Hb_001789_050 Hb_002811_090--Hb_001789_050 Hb_007245_080 Hb_007245_080 Hb_002811_090--Hb_007245_080 Hb_000212_210--Hb_003057_020 Hb_000212_210--Hb_001789_050 Hb_000212_210--Hb_007120_090 Hb_000212_210--Hb_000042_260 Hb_000272_050 Hb_000272_050 Hb_000212_210--Hb_000272_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.9645 9.89762 11.7946 17.2407 14.9011 21.6195
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
24.3729 178.392 19.2489 19.0019 14.8073

CAGE analysis