Hb_001449_090

Information

Type -
Description -
Location Contig1449: 113741-117968
Sequence    

Annotation

kegg
ID rcu:RCOM_1435490
description 2-deoxyglucose-6-phosphate phosphatase, putative (EC:5.4.2.6)
nr
ID XP_012088907.1
description PREDICTED: NHL repeat-containing protein 2 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JHQ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23230 PE=4 SV=1
Gene Ontology
ID GO:0044434
description nhl repeat-containing protein 2 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001449_090 0.0 - - PREDICTED: NHL repeat-containing protein 2 isoform X2 [Jatropha curcas]
2 Hb_001307_210 0.0773504923 - - Os02g0814700 [Oryza sativa Japonica Group]
3 Hb_001225_010 0.112507056 - - unnamed protein product [Coffea canephora]
4 Hb_002909_130 0.1177413512 - - Uncharacterized protein isoform 1 [Theobroma cacao]
5 Hb_012395_130 0.1210597065 - - Os02g0814700 [Oryza sativa Japonica Group]
6 Hb_011377_020 0.1217601466 - - hypothetical protein CARUB_v10018269mg, partial [Capsella rubella]
7 Hb_000878_020 0.1220392398 - - PREDICTED: uncharacterized protein LOC105629937 [Jatropha curcas]
8 Hb_000110_170 0.1250477557 - - PREDICTED: arginine biosynthesis bifunctional protein ArgJ, chloroplastic isoform X1 [Jatropha curcas]
9 Hb_003020_330 0.125713186 - - hypothetical protein B456_010G173100 [Gossypium raimondii]
10 Hb_001369_170 0.1258865975 - - PREDICTED: 60S ribosomal protein L15-1-like [Gossypium raimondii]
11 Hb_000203_020 0.1270090855 - - PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
12 Hb_002105_030 0.1288883899 - - -
13 Hb_006006_050 0.1308890788 - - PREDICTED: methylthioribose kinase-like [Gossypium raimondii]
14 Hb_002344_070 0.1349022955 - - PREDICTED: proteasome subunit alpha type-6 [Jatropha curcas]
15 Hb_006588_080 0.1358442988 - - hypothetical protein JCGZ_25746 [Jatropha curcas]
16 Hb_012053_010 0.1367696576 - - srpk, putative [Ricinus communis]
17 Hb_000788_010 0.1375497463 - - 40S ribosomal protein S16A [Hevea brasiliensis]
18 Hb_043623_010 0.1375504226 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-2 [Jatropha curcas]
19 Hb_001085_270 0.1381900616 - - 60S ribosomal protein L13aA [Hevea brasiliensis]
20 Hb_003540_200 0.1384619261 - - PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Jatropha curcas]

Gene co-expression network

sample Hb_001449_090 Hb_001449_090 Hb_001307_210 Hb_001307_210 Hb_001449_090--Hb_001307_210 Hb_001225_010 Hb_001225_010 Hb_001449_090--Hb_001225_010 Hb_002909_130 Hb_002909_130 Hb_001449_090--Hb_002909_130 Hb_012395_130 Hb_012395_130 Hb_001449_090--Hb_012395_130 Hb_011377_020 Hb_011377_020 Hb_001449_090--Hb_011377_020 Hb_000878_020 Hb_000878_020 Hb_001449_090--Hb_000878_020 Hb_001307_210--Hb_011377_020 Hb_103118_020 Hb_103118_020 Hb_001307_210--Hb_103118_020 Hb_003020_330 Hb_003020_330 Hb_001307_210--Hb_003020_330 Hb_006588_080 Hb_006588_080 Hb_001307_210--Hb_006588_080 Hb_001307_210--Hb_012395_130 Hb_001172_100 Hb_001172_100 Hb_001225_010--Hb_001172_100 Hb_001225_010--Hb_003020_330 Hb_000110_170 Hb_000110_170 Hb_001225_010--Hb_000110_170 Hb_000203_020 Hb_000203_020 Hb_001225_010--Hb_000203_020 Hb_001225_010--Hb_000878_020 Hb_172221_010 Hb_172221_010 Hb_002909_130--Hb_172221_010 Hb_000042_260 Hb_000042_260 Hb_002909_130--Hb_000042_260 Hb_000329_020 Hb_000329_020 Hb_002909_130--Hb_000329_020 Hb_001085_270 Hb_001085_270 Hb_002909_130--Hb_001085_270 Hb_001158_230 Hb_001158_230 Hb_002909_130--Hb_001158_230 Hb_008948_050 Hb_008948_050 Hb_002909_130--Hb_008948_050 Hb_004754_070 Hb_004754_070 Hb_012395_130--Hb_004754_070 Hb_012395_130--Hb_011377_020 Hb_001780_050 Hb_001780_050 Hb_012395_130--Hb_001780_050 Hb_012395_130--Hb_172221_010 Hb_000997_120 Hb_000997_120 Hb_012395_130--Hb_000997_120 Hb_007120_090 Hb_007120_090 Hb_012395_130--Hb_007120_090 Hb_000599_280 Hb_000599_280 Hb_011377_020--Hb_000599_280 Hb_011377_020--Hb_004754_070 Hb_011377_020--Hb_006588_080 Hb_011377_020--Hb_001780_050 Hb_004007_180 Hb_004007_180 Hb_011377_020--Hb_004007_180 Hb_000878_020--Hb_006588_080 Hb_000878_020--Hb_000110_170 Hb_001386_050 Hb_001386_050 Hb_000878_020--Hb_001386_050 Hb_000878_020--Hb_008948_050 Hb_002344_070 Hb_002344_070 Hb_000878_020--Hb_002344_070 Hb_000915_120 Hb_000915_120 Hb_000878_020--Hb_000915_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.413988 0.190642 0.391243 0.779202 0.347338 0.70314
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.33252 6.40899 1.63126 1.23221 0.824066

CAGE analysis