Hb_000167_160

Information

Type -
Description -
Location Contig167: 288884-290857
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000167_160 0.0 - - -
2 Hb_065378_010 0.1658125953 - - S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis]
3 Hb_014549_020 0.2773563461 - - hypothetical protein POPTR_0013s12350g [Populus trichocarpa]
4 Hb_005214_130 0.2879890672 - - -
5 Hb_029920_040 0.2932440242 - - PREDICTED: uncharacterized protein LOC105635837 [Jatropha curcas]
6 Hb_001150_030 0.2971045579 - - NADP-dependent oxidoreductase P1 isoform 3 [Theobroma cacao]
7 Hb_105712_010 0.3003904331 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
8 Hb_150818_020 0.3019646973 - - PREDICTED: uncharacterized protein LOC105645039 [Jatropha curcas]
9 Hb_011316_120 0.3032211668 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH118-like [Jatropha curcas]
10 Hb_000316_020 0.304515311 - - protein binding protein, putative [Ricinus communis]
11 Hb_000436_010 0.3079842091 - - PREDICTED: probable polyamine transporter At1g31830 isoform X1 [Eucalyptus grandis]
12 Hb_000912_020 0.3098750819 - - PREDICTED: uncharacterized protein LOC105645039 [Jatropha curcas]
13 Hb_001005_070 0.3102923694 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF113-like [Jatropha curcas]
14 Hb_001892_120 0.3107117197 - - PREDICTED: MLP-like protein 328 [Jatropha curcas]
15 Hb_008516_040 0.3120266938 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001279_130 0.3136404565 - - hypothetical protein L484_017676 [Morus notabilis]
17 Hb_000116_420 0.3144401044 - - PREDICTED: monosaccharide-sensing protein 2-like [Jatropha curcas]
18 Hb_009314_010 0.3165322559 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
19 Hb_003095_040 0.31732575 - - hypothetical protein CICLE_v10030016mg [Citrus clementina]
20 Hb_004195_100 0.3223141527 - - PREDICTED: uncharacterized protein LOC104106427 [Nicotiana tomentosiformis]

Gene co-expression network

sample Hb_000167_160 Hb_000167_160 Hb_065378_010 Hb_065378_010 Hb_000167_160--Hb_065378_010 Hb_014549_020 Hb_014549_020 Hb_000167_160--Hb_014549_020 Hb_005214_130 Hb_005214_130 Hb_000167_160--Hb_005214_130 Hb_029920_040 Hb_029920_040 Hb_000167_160--Hb_029920_040 Hb_001150_030 Hb_001150_030 Hb_000167_160--Hb_001150_030 Hb_105712_010 Hb_105712_010 Hb_000167_160--Hb_105712_010 Hb_000912_020 Hb_000912_020 Hb_065378_010--Hb_000912_020 Hb_150818_020 Hb_150818_020 Hb_065378_010--Hb_150818_020 Hb_065378_010--Hb_029920_040 Hb_000316_020 Hb_000316_020 Hb_065378_010--Hb_000316_020 Hb_008516_040 Hb_008516_040 Hb_065378_010--Hb_008516_040 Hb_001100_010 Hb_001100_010 Hb_014549_020--Hb_001100_010 Hb_001766_100 Hb_001766_100 Hb_014549_020--Hb_001766_100 Hb_000436_010 Hb_000436_010 Hb_014549_020--Hb_000436_010 Hb_006816_450 Hb_006816_450 Hb_014549_020--Hb_006816_450 Hb_007161_010 Hb_007161_010 Hb_014549_020--Hb_007161_010 Hb_001005_070 Hb_001005_070 Hb_014549_020--Hb_001005_070 Hb_042729_010 Hb_042729_010 Hb_005214_130--Hb_042729_010 Hb_005539_210 Hb_005539_210 Hb_005214_130--Hb_005539_210 Hb_004206_030 Hb_004206_030 Hb_005214_130--Hb_004206_030 Hb_001012_040 Hb_001012_040 Hb_005214_130--Hb_001012_040 Hb_001279_130 Hb_001279_130 Hb_005214_130--Hb_001279_130 Hb_003106_140 Hb_003106_140 Hb_005214_130--Hb_003106_140 Hb_004195_100 Hb_004195_100 Hb_029920_040--Hb_004195_100 Hb_002943_030 Hb_002943_030 Hb_029920_040--Hb_002943_030 Hb_029920_040--Hb_150818_020 Hb_029920_040--Hb_000912_020 Hb_029920_040--Hb_001150_030 Hb_012660_020 Hb_012660_020 Hb_001150_030--Hb_012660_020 Hb_003878_030 Hb_003878_030 Hb_001150_030--Hb_003878_030 Hb_001150_030--Hb_002943_030 Hb_003647_030 Hb_003647_030 Hb_001150_030--Hb_003647_030 Hb_002609_060 Hb_002609_060 Hb_001150_030--Hb_002609_060 Hb_000098_220 Hb_000098_220 Hb_001150_030--Hb_000098_220 Hb_105712_010--Hb_002943_030 Hb_150751_010 Hb_150751_010 Hb_105712_010--Hb_150751_010 Hb_003335_070 Hb_003335_070 Hb_105712_010--Hb_003335_070 Hb_005128_040 Hb_005128_040 Hb_105712_010--Hb_005128_040 Hb_004705_030 Hb_004705_030 Hb_105712_010--Hb_004705_030 Hb_105712_010--Hb_005214_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.825236 0 0 0 0.164264 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.816787 0.965925 1.3486 1.64882 0

CAGE analysis