Hb_150818_020

Information

Type -
Description -
Location Contig150818: 31915-32238
Sequence    

Annotation

kegg
ID tcc:TCM_019992
description SAUR-like auxin-responsive protein family
nr
ID XP_012085928.1
description PREDICTED: uncharacterized protein LOC105645039 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K3D2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22289 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_150818_020 0.0 - - PREDICTED: uncharacterized protein LOC105645039 [Jatropha curcas]
2 Hb_008516_040 0.1347041948 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002989_060 0.1603839307 - - hypothetical protein JCGZ_22461 [Jatropha curcas]
4 Hb_000912_020 0.1641533516 - - PREDICTED: uncharacterized protein LOC105645039 [Jatropha curcas]
5 Hb_003052_210 0.2019666791 - - conserved hypothetical protein [Ricinus communis]
6 Hb_065378_010 0.2168102688 - - S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis]
7 Hb_009644_040 0.2396507221 - - PREDICTED: protein SKIP34 [Jatropha curcas]
8 Hb_108528_010 0.258392584 - - unnamed protein product [Coffea canephora]
9 Hb_004291_010 0.2663809733 - - (R)-limonene synthase, putative [Ricinus communis]
10 Hb_105602_020 0.2699623155 - - PREDICTED: 60S ribosomal protein L19-1-like [Populus euphratica]
11 Hb_029920_040 0.2715620306 - - PREDICTED: uncharacterized protein LOC105635837 [Jatropha curcas]
12 Hb_179520_010 0.2755540265 - - PREDICTED: uncharacterized protein LOC105763691 [Gossypium raimondii]
13 Hb_004064_020 0.2761789869 - - hypothetical protein M569_06853, partial [Genlisea aurea]
14 Hb_002928_210 0.2773347428 - - -
15 Hb_002151_050 0.2804766906 - - cytochrome P450, putative [Ricinus communis]
16 Hb_002253_060 0.2811084755 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001114_050 0.2811751846 - - hypothetical protein RCOM_0744580 [Ricinus communis]
18 Hb_011316_120 0.2845195419 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH118-like [Jatropha curcas]
19 Hb_073866_010 0.2852001053 - - PREDICTED: N-alpha-acetyltransferase 20-like [Jatropha curcas]
20 Hb_003754_080 0.2903400865 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]

Gene co-expression network

sample Hb_150818_020 Hb_150818_020 Hb_008516_040 Hb_008516_040 Hb_150818_020--Hb_008516_040 Hb_002989_060 Hb_002989_060 Hb_150818_020--Hb_002989_060 Hb_000912_020 Hb_000912_020 Hb_150818_020--Hb_000912_020 Hb_003052_210 Hb_003052_210 Hb_150818_020--Hb_003052_210 Hb_065378_010 Hb_065378_010 Hb_150818_020--Hb_065378_010 Hb_009644_040 Hb_009644_040 Hb_150818_020--Hb_009644_040 Hb_008516_040--Hb_000912_020 Hb_108528_010 Hb_108528_010 Hb_008516_040--Hb_108528_010 Hb_179520_010 Hb_179520_010 Hb_008516_040--Hb_179520_010 Hb_004064_020 Hb_004064_020 Hb_008516_040--Hb_004064_020 Hb_008516_040--Hb_002989_060 Hb_002989_060--Hb_000912_020 Hb_002989_060--Hb_009644_040 Hb_002989_060--Hb_003052_210 Hb_001355_130 Hb_001355_130 Hb_002989_060--Hb_001355_130 Hb_011316_120 Hb_011316_120 Hb_000912_020--Hb_011316_120 Hb_000912_020--Hb_065378_010 Hb_003754_080 Hb_003754_080 Hb_000912_020--Hb_003754_080 Hb_000720_190 Hb_000720_190 Hb_003052_210--Hb_000720_190 Hb_003052_210--Hb_108528_010 Hb_003052_210--Hb_179520_010 Hb_105602_020 Hb_105602_020 Hb_003052_210--Hb_105602_020 Hb_017134_010 Hb_017134_010 Hb_003052_210--Hb_017134_010 Hb_000167_160 Hb_000167_160 Hb_065378_010--Hb_000167_160 Hb_029920_040 Hb_029920_040 Hb_065378_010--Hb_029920_040 Hb_000316_020 Hb_000316_020 Hb_065378_010--Hb_000316_020 Hb_065378_010--Hb_008516_040 Hb_073866_010 Hb_073866_010 Hb_009644_040--Hb_073866_010 Hb_001114_050 Hb_001114_050 Hb_009644_040--Hb_001114_050 Hb_001842_130 Hb_001842_130 Hb_009644_040--Hb_001842_130 Hb_009644_040--Hb_008516_040 Hb_115940_010 Hb_115940_010 Hb_009644_040--Hb_115940_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.123415 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.03893 4.64312 3.60914 6.01454 0

CAGE analysis