Hb_073866_010

Information

Type -
Description -
Location Contig73866: 1992-2752
Sequence    

Annotation

kegg
ID brp:103836630
description N-alpha-acetyltransferase 20-like
nr
ID XP_012075206.1
description PREDICTED: N-alpha-acetyltransferase 20-like [Jatropha curcas]
swissprot
ID Q8SSN5
description N-alpha-acetyltransferase 20 OS=Dictyostelium discoideum GN=nat5 PE=3 SV=2
trembl
ID M4EP01
description Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra030521 PE=4 SV=1
Gene Ontology
ID GO:0008080
description n-alpha-acetyltransferase 20-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_073866_010 0.0 - - PREDICTED: N-alpha-acetyltransferase 20-like [Jatropha curcas]
2 Hb_009644_040 0.1868528137 - - PREDICTED: protein SKIP34 [Jatropha curcas]
3 Hb_115940_010 0.2002427815 - - putative auxin-amidohydrolase precursor family protein [Populus trichocarpa]
4 Hb_002918_040 0.2541596197 transcription factor TF Family: SBP Squamosa promoter-binding protein, putative [Ricinus communis]
5 Hb_006342_020 0.2583493693 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
6 Hb_000252_110 0.2664434918 - - -
7 Hb_156182_010 0.2705269986 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
8 Hb_004032_120 0.2714446926 - - PREDICTED: uncharacterized protein LOC104896902 [Beta vulgaris subsp. vulgaris]
9 Hb_001114_050 0.275763711 - - hypothetical protein RCOM_0744580 [Ricinus communis]
10 Hb_002286_010 0.2770299846 - - kinase-like protein pac.x.7.4, partial [Platanus x acerifolia]
11 Hb_000906_130 0.2781402319 - - -
12 Hb_000200_290 0.2783559227 - - PREDICTED: elongator complex protein 2 isoform X1 [Jatropha curcas]
13 Hb_000084_320 0.2842819845 - - PREDICTED: probable small nuclear ribonucleoprotein G [Populus euphratica]
14 Hb_150818_020 0.2852001053 - - PREDICTED: uncharacterized protein LOC105645039 [Jatropha curcas]
15 Hb_003052_210 0.2875524881 - - conserved hypothetical protein [Ricinus communis]
16 Hb_007218_070 0.2889001298 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001842_130 0.2893266348 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000184_230 0.2903338723 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Jatropha curcas]
19 Hb_001163_090 0.2915573271 - - hypothetical protein POPTR_0009s14920g [Populus trichocarpa]
20 Hb_002151_050 0.2920456175 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_073866_010 Hb_073866_010 Hb_009644_040 Hb_009644_040 Hb_073866_010--Hb_009644_040 Hb_115940_010 Hb_115940_010 Hb_073866_010--Hb_115940_010 Hb_002918_040 Hb_002918_040 Hb_073866_010--Hb_002918_040 Hb_006342_020 Hb_006342_020 Hb_073866_010--Hb_006342_020 Hb_000252_110 Hb_000252_110 Hb_073866_010--Hb_000252_110 Hb_156182_010 Hb_156182_010 Hb_073866_010--Hb_156182_010 Hb_001114_050 Hb_001114_050 Hb_009644_040--Hb_001114_050 Hb_001842_130 Hb_001842_130 Hb_009644_040--Hb_001842_130 Hb_008516_040 Hb_008516_040 Hb_009644_040--Hb_008516_040 Hb_150818_020 Hb_150818_020 Hb_009644_040--Hb_150818_020 Hb_009644_040--Hb_115940_010 Hb_115940_010--Hb_006342_020 Hb_115940_010--Hb_156182_010 Hb_001163_090 Hb_001163_090 Hb_115940_010--Hb_001163_090 Hb_003124_060 Hb_003124_060 Hb_115940_010--Hb_003124_060 Hb_005054_270 Hb_005054_270 Hb_115940_010--Hb_005054_270 Hb_107504_010 Hb_107504_010 Hb_002918_040--Hb_107504_010 Hb_012799_020 Hb_012799_020 Hb_002918_040--Hb_012799_020 Hb_000453_300 Hb_000453_300 Hb_002918_040--Hb_000453_300 Hb_010174_010 Hb_010174_010 Hb_002918_040--Hb_010174_010 Hb_001936_140 Hb_001936_140 Hb_002918_040--Hb_001936_140 Hb_004650_100 Hb_004650_100 Hb_002918_040--Hb_004650_100 Hb_006342_020--Hb_005054_270 Hb_000084_320 Hb_000084_320 Hb_006342_020--Hb_000084_320 Hb_001159_200 Hb_001159_200 Hb_006342_020--Hb_001159_200 Hb_000592_060 Hb_000592_060 Hb_006342_020--Hb_000592_060 Hb_003376_290 Hb_003376_290 Hb_006342_020--Hb_003376_290 Hb_004453_080 Hb_004453_080 Hb_000252_110--Hb_004453_080 Hb_005656_100 Hb_005656_100 Hb_000252_110--Hb_005656_100 Hb_000041_240 Hb_000041_240 Hb_000252_110--Hb_000041_240 Hb_004931_100 Hb_004931_100 Hb_000252_110--Hb_004931_100 Hb_001171_050 Hb_001171_050 Hb_000252_110--Hb_001171_050 Hb_001433_110 Hb_001433_110 Hb_000252_110--Hb_001433_110 Hb_001366_070 Hb_001366_070 Hb_156182_010--Hb_001366_070 Hb_006738_030 Hb_006738_030 Hb_156182_010--Hb_006738_030 Hb_021888_070 Hb_021888_070 Hb_156182_010--Hb_021888_070 Hb_002918_050 Hb_002918_050 Hb_156182_010--Hb_002918_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.364836 0 0.732712 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.24465 3.73278 3.77352 4.97599 1.6031

CAGE analysis