Hb_000733_130

Information

Type -
Description -
Location Contig733: 101455-111440
Sequence    

Annotation

kegg
ID vvi:100258131
description cucumisin
nr
ID XP_010658658.1
description PREDICTED: cucumisin [Vitis vinifera]
swissprot
ID Q39547
description Cucumisin OS=Cucumis melo PE=1 SV=1
trembl
ID A0A067L8T2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01361 PE=4 SV=1
Gene Ontology
ID GO:0004252
description cucumisin-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000733_130 0.0 - - PREDICTED: cucumisin [Vitis vinifera]
2 Hb_000043_070 0.3114185479 - - PREDICTED: transcription factor IBH1 [Jatropha curcas]
3 Hb_011063_020 0.3130379797 - - PREDICTED: ribosomal L1 domain-containing protein 1-like [Jatropha curcas]
4 Hb_000160_030 0.3200622909 - - putative S-adenosylmethionine-dependent methyltransferase [Morus notabilis]
5 Hb_004460_010 0.3213255524 - - PREDICTED: SKI/DACH domain-containing protein 1-like [Jatropha curcas]
6 Hb_002118_040 0.321652349 - - PREDICTED: uncharacterized protein LOC104727990 [Camelina sativa]
7 Hb_026048_020 0.3284167921 - - PREDICTED: uncharacterized protein LOC105645738 [Jatropha curcas]
8 Hb_000964_060 0.3372733283 - - hypothetical protein POPTR_0009s06660g [Populus trichocarpa]
9 Hb_002110_020 0.3383403271 - - PREDICTED: transcription factor bHLH145 [Jatropha curcas]
10 Hb_000190_240 0.3415260135 - - unnamed protein product [Coffea canephora]
11 Hb_023732_040 0.3423096907 - - cytochrome P450, putative [Ricinus communis]
12 Hb_005211_160 0.3432446015 - - Protein PNS1, putative [Ricinus communis]
13 Hb_004195_250 0.3438346166 - - hypothetical protein PRUPE_ppa015658mg [Prunus persica]
14 Hb_161072_010 0.3447190859 - - -
15 Hb_001946_410 0.3473321864 transcription factor TF Family: C3H conserved hypothetical protein [Ricinus communis]
16 Hb_001799_080 0.3479468736 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
17 Hb_004225_150 0.3499461681 transcription factor TF Family: C3H PREDICTED: zinc finger protein 36, C3H1 type-like 3 [Jatropha curcas]
18 Hb_000313_210 0.3522084523 - - conserved hypothetical protein [Ricinus communis]
19 Hb_027028_030 0.3522403737 - - conserved hypothetical protein [Ricinus communis]
20 Hb_006452_220 0.3526604974 - - PREDICTED: uncharacterized protein LOC105635043 [Jatropha curcas]

Gene co-expression network

sample Hb_000733_130 Hb_000733_130 Hb_000043_070 Hb_000043_070 Hb_000733_130--Hb_000043_070 Hb_011063_020 Hb_011063_020 Hb_000733_130--Hb_011063_020 Hb_000160_030 Hb_000160_030 Hb_000733_130--Hb_000160_030 Hb_004460_010 Hb_004460_010 Hb_000733_130--Hb_004460_010 Hb_002118_040 Hb_002118_040 Hb_000733_130--Hb_002118_040 Hb_026048_020 Hb_026048_020 Hb_000733_130--Hb_026048_020 Hb_006153_080 Hb_006153_080 Hb_000043_070--Hb_006153_080 Hb_000579_020 Hb_000579_020 Hb_000043_070--Hb_000579_020 Hb_001277_090 Hb_001277_090 Hb_000043_070--Hb_001277_090 Hb_002150_060 Hb_002150_060 Hb_000043_070--Hb_002150_060 Hb_005569_020 Hb_005569_020 Hb_000043_070--Hb_005569_020 Hb_001946_410 Hb_001946_410 Hb_000043_070--Hb_001946_410 Hb_003688_170 Hb_003688_170 Hb_011063_020--Hb_003688_170 Hb_011063_020--Hb_000160_030 Hb_000590_030 Hb_000590_030 Hb_011063_020--Hb_000590_030 Hb_024404_010 Hb_024404_010 Hb_011063_020--Hb_024404_010 Hb_000251_090 Hb_000251_090 Hb_011063_020--Hb_000251_090 Hb_002139_010 Hb_002139_010 Hb_011063_020--Hb_002139_010 Hb_000160_030--Hb_003688_170 Hb_000160_030--Hb_000590_030 Hb_011639_060 Hb_011639_060 Hb_000160_030--Hb_011639_060 Hb_000392_390 Hb_000392_390 Hb_000160_030--Hb_000392_390 Hb_000160_030--Hb_002139_010 Hb_013818_060 Hb_013818_060 Hb_004460_010--Hb_013818_060 Hb_001799_080 Hb_001799_080 Hb_004460_010--Hb_001799_080 Hb_000120_120 Hb_000120_120 Hb_004460_010--Hb_000120_120 Hb_011360_080 Hb_011360_080 Hb_004460_010--Hb_011360_080 Hb_003599_070 Hb_003599_070 Hb_004460_010--Hb_003599_070 Hb_000477_080 Hb_000477_080 Hb_004460_010--Hb_000477_080 Hb_001190_090 Hb_001190_090 Hb_002118_040--Hb_001190_090 Hb_000042_190 Hb_000042_190 Hb_002118_040--Hb_000042_190 Hb_103604_010 Hb_103604_010 Hb_002118_040--Hb_103604_010 Hb_006586_010 Hb_006586_010 Hb_002118_040--Hb_006586_010 Hb_052983_010 Hb_052983_010 Hb_002118_040--Hb_052983_010 Hb_002110_020 Hb_002110_020 Hb_026048_020--Hb_002110_020 Hb_000239_020 Hb_000239_020 Hb_026048_020--Hb_000239_020 Hb_031862_130 Hb_031862_130 Hb_026048_020--Hb_031862_130 Hb_001930_040 Hb_001930_040 Hb_026048_020--Hb_001930_040 Hb_000069_170 Hb_000069_170 Hb_026048_020--Hb_000069_170 Hb_004586_210 Hb_004586_210 Hb_026048_020--Hb_004586_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0235854 0.00370217 0.00350374 0.00660951 0.00450756 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.00802955 0.0462962 0.00635908 0

CAGE analysis