Hb_103604_010

Information

Type -
Description -
Location Contig103604: 1043-1615
Sequence    

Annotation

kegg
ID pop:POPTR_0001s43820g
description hypothetical protein
nr
ID XP_012479950.1
description PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
swissprot
ID -
description -
trembl
ID A0A067KGR8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15340 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_103604_010 0.0 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
2 Hb_012338_020 0.3102573085 - - -
3 Hb_001190_090 0.3126527315 - - PREDICTED: uncharacterized protein LOC105638813 [Jatropha curcas]
4 Hb_007547_020 0.3220867682 - - PREDICTED: mitogen-activated protein kinase kinase kinase A-like [Populus euphratica]
5 Hb_002118_040 0.3227075658 - - PREDICTED: uncharacterized protein LOC104727990 [Camelina sativa]
6 Hb_001391_140 0.3267613095 - - PREDICTED: uncharacterized protein LOC101293660 [Fragaria vesca subsp. vesca]
7 Hb_000453_110 0.3363578347 - - PREDICTED: alkaline/neutral invertase CINV2-like isoform X1 [Citrus sinensis]
8 Hb_006586_010 0.3436176308 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
9 Hb_165666_010 0.3530734345 - - -
10 Hb_009467_050 0.3687112004 - - interferon-induced GTP-binding protein mx, putative [Ricinus communis]
11 Hb_004324_160 0.3709597738 - - PREDICTED: uncharacterized protein LOC105641067 [Jatropha curcas]
12 Hb_000321_130 0.3744207102 - - Alcohol dehydrogenase, putative [Ricinus communis]
13 Hb_006938_070 0.3748198792 - - PREDICTED: uncharacterized protein LOC104893877 [Beta vulgaris subsp. vulgaris]
14 Hb_000249_120 0.3780949139 - - PREDICTED: uncharacterized protein LOC104613364 [Nelumbo nucifera]
15 Hb_002374_120 0.379637163 - - PREDICTED: pentatricopeptide repeat-containing protein At1g77405 [Jatropha curcas]
16 Hb_007021_010 0.3857811018 transcription factor TF Family: B3 hypothetical protein RCOM_0939100 [Ricinus communis]
17 Hb_004108_030 0.3867062488 - - -
18 Hb_007483_110 0.3893342633 - - PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 1-like [Populus euphratica]
19 Hb_000733_130 0.3981982033 - - PREDICTED: cucumisin [Vitis vinifera]
20 Hb_001966_010 0.3994020229 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]

Gene co-expression network

sample Hb_103604_010 Hb_103604_010 Hb_012338_020 Hb_012338_020 Hb_103604_010--Hb_012338_020 Hb_001190_090 Hb_001190_090 Hb_103604_010--Hb_001190_090 Hb_007547_020 Hb_007547_020 Hb_103604_010--Hb_007547_020 Hb_002118_040 Hb_002118_040 Hb_103604_010--Hb_002118_040 Hb_001391_140 Hb_001391_140 Hb_103604_010--Hb_001391_140 Hb_000453_110 Hb_000453_110 Hb_103604_010--Hb_000453_110 Hb_012338_020--Hb_007547_020 Hb_004324_160 Hb_004324_160 Hb_012338_020--Hb_004324_160 Hb_000321_130 Hb_000321_130 Hb_012338_020--Hb_000321_130 Hb_008505_020 Hb_008505_020 Hb_012338_020--Hb_008505_020 Hb_033835_020 Hb_033835_020 Hb_012338_020--Hb_033835_020 Hb_001741_130 Hb_001741_130 Hb_012338_020--Hb_001741_130 Hb_001190_090--Hb_002118_040 Hb_004757_030 Hb_004757_030 Hb_001190_090--Hb_004757_030 Hb_005078_030 Hb_005078_030 Hb_001190_090--Hb_005078_030 Hb_002357_050 Hb_002357_050 Hb_001190_090--Hb_002357_050 Hb_006938_070 Hb_006938_070 Hb_001190_090--Hb_006938_070 Hb_001318_090 Hb_001318_090 Hb_001190_090--Hb_001318_090 Hb_007547_020--Hb_004324_160 Hb_007547_020--Hb_000321_130 Hb_001008_140 Hb_001008_140 Hb_007547_020--Hb_001008_140 Hb_011249_040 Hb_011249_040 Hb_007547_020--Hb_011249_040 Hb_000042_190 Hb_000042_190 Hb_002118_040--Hb_000042_190 Hb_000733_130 Hb_000733_130 Hb_002118_040--Hb_000733_130 Hb_006586_010 Hb_006586_010 Hb_002118_040--Hb_006586_010 Hb_052983_010 Hb_052983_010 Hb_002118_040--Hb_052983_010 Hb_156473_010 Hb_156473_010 Hb_001391_140--Hb_156473_010 Hb_000784_040 Hb_000784_040 Hb_001391_140--Hb_000784_040 Hb_042223_010 Hb_042223_010 Hb_001391_140--Hb_042223_010 Hb_003599_070 Hb_003599_070 Hb_001391_140--Hb_003599_070 Hb_091433_040 Hb_091433_040 Hb_001391_140--Hb_091433_040 Hb_000227_200 Hb_000227_200 Hb_001391_140--Hb_000227_200 Hb_007483_110 Hb_007483_110 Hb_000453_110--Hb_007483_110 Hb_003197_070 Hb_003197_070 Hb_000453_110--Hb_003197_070 Hb_001842_030 Hb_001842_030 Hb_000453_110--Hb_001842_030 Hb_000215_370 Hb_000215_370 Hb_000453_110--Hb_000215_370 Hb_006921_040 Hb_006921_040 Hb_000453_110--Hb_006921_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0591445 0 0.0377965 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0850428 0.147687 0 0

CAGE analysis