Hb_080761_010

Information

Type -
Description -
Location Contig80761: 3-954
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012075160.1
description PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_080761_010 0.0 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
2 Hb_006569_050 0.206978501 - - -
3 Hb_000958_100 0.210378684 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
4 Hb_015778_060 0.2170242484 - - PREDICTED: uncharacterized protein LOC105650696 [Jatropha curcas]
5 Hb_007576_150 0.2207884073 - - PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic [Jatropha curcas]
6 Hb_000856_320 0.2329289672 - - PREDICTED: mitochondrial outer membrane protein porin of 36 kDa-like [Jatropha curcas]
7 Hb_009150_030 0.2383367436 - - hypothetical protein POPTR_0010s14920g [Populus trichocarpa]
8 Hb_004319_060 0.2416396895 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
9 Hb_030131_030 0.2425716814 - - PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Jatropha curcas]
10 Hb_028707_110 0.2452767301 - - PREDICTED: uncharacterized protein LOC105645798 [Jatropha curcas]
11 Hb_002374_250 0.2456697138 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000404_040 0.2465091385 - - conserved hypothetical protein [Ricinus communis]
13 Hb_031091_030 0.2468582196 - - hypothetical protein OsI_25921 [Oryza sativa Indica Group]
14 Hb_000997_140 0.2481232671 - - PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Jatropha curcas]
15 Hb_022378_010 0.2485442988 - - PREDICTED: uncharacterized protein LOC105634715 isoform X1 [Jatropha curcas]
16 Hb_003929_220 0.2489767215 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
17 Hb_017098_060 0.2494323326 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Pyrus x bretschneideri]
18 Hb_002078_270 0.249575003 - - PREDICTED: F-box protein At1g67340 [Jatropha curcas]
19 Hb_002631_250 0.2503051315 - - PREDICTED: pentatricopeptide repeat-containing protein At3g20730 [Jatropha curcas]
20 Hb_001890_010 0.2517221354 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]

Gene co-expression network

sample Hb_080761_010 Hb_080761_010 Hb_006569_050 Hb_006569_050 Hb_080761_010--Hb_006569_050 Hb_000958_100 Hb_000958_100 Hb_080761_010--Hb_000958_100 Hb_015778_060 Hb_015778_060 Hb_080761_010--Hb_015778_060 Hb_007576_150 Hb_007576_150 Hb_080761_010--Hb_007576_150 Hb_000856_320 Hb_000856_320 Hb_080761_010--Hb_000856_320 Hb_009150_030 Hb_009150_030 Hb_080761_010--Hb_009150_030 Hb_005523_010 Hb_005523_010 Hb_006569_050--Hb_005523_010 Hb_002374_250 Hb_002374_250 Hb_006569_050--Hb_002374_250 Hb_000705_250 Hb_000705_250 Hb_006569_050--Hb_000705_250 Hb_000529_140 Hb_000529_140 Hb_006569_050--Hb_000529_140 Hb_005754_030 Hb_005754_030 Hb_006569_050--Hb_005754_030 Hb_021079_020 Hb_021079_020 Hb_000958_100--Hb_021079_020 Hb_007317_130 Hb_007317_130 Hb_000958_100--Hb_007317_130 Hb_000958_100--Hb_015778_060 Hb_000212_370 Hb_000212_370 Hb_000958_100--Hb_000212_370 Hb_004162_190 Hb_004162_190 Hb_000958_100--Hb_004162_190 Hb_002078_270 Hb_002078_270 Hb_000958_100--Hb_002078_270 Hb_002973_110 Hb_002973_110 Hb_015778_060--Hb_002973_110 Hb_000186_080 Hb_000186_080 Hb_015778_060--Hb_000186_080 Hb_002986_070 Hb_002986_070 Hb_015778_060--Hb_002986_070 Hb_013399_090 Hb_013399_090 Hb_015778_060--Hb_013399_090 Hb_015778_060--Hb_021079_020 Hb_000320_360 Hb_000320_360 Hb_015778_060--Hb_000320_360 Hb_000934_020 Hb_000934_020 Hb_007576_150--Hb_000934_020 Hb_000189_250 Hb_000189_250 Hb_007576_150--Hb_000189_250 Hb_000640_260 Hb_000640_260 Hb_007576_150--Hb_000640_260 Hb_003029_140 Hb_003029_140 Hb_007576_150--Hb_003029_140 Hb_001890_010 Hb_001890_010 Hb_007576_150--Hb_001890_010 Hb_003878_080 Hb_003878_080 Hb_007576_150--Hb_003878_080 Hb_141990_020 Hb_141990_020 Hb_000856_320--Hb_141990_020 Hb_000856_320--Hb_000958_100 Hb_017098_060 Hb_017098_060 Hb_000856_320--Hb_017098_060 Hb_002188_030 Hb_002188_030 Hb_000856_320--Hb_002188_030 Hb_005466_010 Hb_005466_010 Hb_000856_320--Hb_005466_010 Hb_003494_130 Hb_003494_130 Hb_000856_320--Hb_003494_130 Hb_003124_110 Hb_003124_110 Hb_009150_030--Hb_003124_110 Hb_000120_040 Hb_000120_040 Hb_009150_030--Hb_000120_040 Hb_001214_180 Hb_001214_180 Hb_009150_030--Hb_001214_180 Hb_009150_030--Hb_007576_150 Hb_002290_030 Hb_002290_030 Hb_009150_030--Hb_002290_030 Hb_000318_130 Hb_000318_130 Hb_009150_030--Hb_000318_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.184003 0.130455 0.0333431 0.064013 0.0743521
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0618822 0.110664 0.0754704 0.368053

CAGE analysis