Hb_017151_010

Information

Type -
Description -
Location Contig17151: 5431-12755
Sequence    

Annotation

kegg
ID rcu:RCOM_0704650
description hypothetical protein
nr
ID XP_012082010.1
description PREDICTED: uncharacterized protein LOC105641966 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K2U3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18274 PE=4 SV=1
Gene Ontology
ID GO:0009536
description PREDICTED: uncharacterized protein LOC105641966

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017151_010 0.0 - - PREDICTED: uncharacterized protein LOC105641966 [Jatropha curcas]
2 Hb_025557_050 0.0473575065 - - PREDICTED: pentatricopeptide repeat-containing protein At1g74630 [Jatropha curcas]
3 Hb_053079_020 0.0682492314 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1 [Jatropha curcas]
4 Hb_001789_190 0.06930241 - - PREDICTED: uncharacterized protein LOC105648441 [Jatropha curcas]
5 Hb_000115_280 0.0732899205 - - PREDICTED: glutamine--tRNA ligase [Jatropha curcas]
6 Hb_001619_050 0.0744289836 - - PREDICTED: uncharacterized protein LOC105630599 isoform X1 [Jatropha curcas]
7 Hb_032202_080 0.0756657483 - - PREDICTED: peroxisome biogenesis protein 16-like isoform X1 [Jatropha curcas]
8 Hb_000864_030 0.0776825705 - - PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1 isoform X2 [Jatropha curcas]
9 Hb_008059_010 0.0788965649 - - PREDICTED: pentatricopeptide repeat-containing protein At5g04810, chloroplastic [Jatropha curcas]
10 Hb_132840_110 0.0789002262 rubber biosynthesis Gene Name: Pyruvate dehydrogenase pyruvate dehydrogenase, putative [Ricinus communis]
11 Hb_000457_230 0.081254301 - - PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Jatropha curcas]
12 Hb_007765_100 0.0812730248 - - PREDICTED: helicase SKI2W [Jatropha curcas]
13 Hb_004912_030 0.0821805163 transcription factor TF Family: Jumonji PREDICTED: uncharacterized protein LOC105650086 [Jatropha curcas]
14 Hb_003186_020 0.0828501335 - - PREDICTED: histone deacetylase 15 isoform X1 [Jatropha curcas]
15 Hb_031284_010 0.0834794226 - - PREDICTED: uncharacterized protein LOC105633543 [Jatropha curcas]
16 Hb_004800_180 0.0845842875 - - PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Populus euphratica]
17 Hb_002311_310 0.0855441933 - - PREDICTED: uncharacterized protein LOC100246622 [Vitis vinifera]
18 Hb_000445_140 0.0856365669 - - hypothetical protein RCOM_0561550 [Ricinus communis]
19 Hb_000922_020 0.0869619618 - - protein binding protein, putative [Ricinus communis]
20 Hb_001377_110 0.0874847335 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Jatropha curcas]

Gene co-expression network

sample Hb_017151_010 Hb_017151_010 Hb_025557_050 Hb_025557_050 Hb_017151_010--Hb_025557_050 Hb_053079_020 Hb_053079_020 Hb_017151_010--Hb_053079_020 Hb_001789_190 Hb_001789_190 Hb_017151_010--Hb_001789_190 Hb_000115_280 Hb_000115_280 Hb_017151_010--Hb_000115_280 Hb_001619_050 Hb_001619_050 Hb_017151_010--Hb_001619_050 Hb_032202_080 Hb_032202_080 Hb_017151_010--Hb_032202_080 Hb_025557_050--Hb_001789_190 Hb_010812_050 Hb_010812_050 Hb_025557_050--Hb_010812_050 Hb_008059_010 Hb_008059_010 Hb_025557_050--Hb_008059_010 Hb_004097_070 Hb_004097_070 Hb_025557_050--Hb_004097_070 Hb_031284_010 Hb_031284_010 Hb_025557_050--Hb_031284_010 Hb_053079_020--Hb_000115_280 Hb_000214_050 Hb_000214_050 Hb_053079_020--Hb_000214_050 Hb_003186_020 Hb_003186_020 Hb_053079_020--Hb_003186_020 Hb_008247_020 Hb_008247_020 Hb_053079_020--Hb_008247_020 Hb_000243_210 Hb_000243_210 Hb_053079_020--Hb_000243_210 Hb_001789_190--Hb_004097_070 Hb_132840_110 Hb_132840_110 Hb_001789_190--Hb_132840_110 Hb_001001_080 Hb_001001_080 Hb_001789_190--Hb_001001_080 Hb_001021_220 Hb_001021_220 Hb_001789_190--Hb_001021_220 Hb_000115_280--Hb_031284_010 Hb_000115_280--Hb_003186_020 Hb_000115_280--Hb_008059_010 Hb_000390_230 Hb_000390_230 Hb_000115_280--Hb_000390_230 Hb_000457_230 Hb_000457_230 Hb_000115_280--Hb_000457_230 Hb_000445_140 Hb_000445_140 Hb_001619_050--Hb_000445_140 Hb_000640_160 Hb_000640_160 Hb_001619_050--Hb_000640_160 Hb_001014_100 Hb_001014_100 Hb_001619_050--Hb_001014_100 Hb_003225_020 Hb_003225_020 Hb_001619_050--Hb_003225_020 Hb_002870_020 Hb_002870_020 Hb_001619_050--Hb_002870_020 Hb_032202_080--Hb_000457_230 Hb_002615_120 Hb_002615_120 Hb_032202_080--Hb_002615_120 Hb_001776_060 Hb_001776_060 Hb_032202_080--Hb_001776_060 Hb_138435_010 Hb_138435_010 Hb_032202_080--Hb_138435_010 Hb_008568_020 Hb_008568_020 Hb_032202_080--Hb_008568_020 Hb_001405_190 Hb_001405_190 Hb_032202_080--Hb_001405_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.16388 4.14376 6.24618 3.67772 5.31094 3.78545
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.82267 2.57259 3.1092 3.10306 6.37233

CAGE analysis