Hb_007810_130

Information

Type -
Description -
Location Contig7810: 87021-92856
Sequence    

Annotation

kegg
ID pmum:103337133
description ankyrin-1-like
nr
ID XP_008238508.1
description PREDICTED: ankyrin-1-like [Prunus mume]
swissprot
ID Q02357
description Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2
trembl
ID W9S5J8
description Uncharacterized protein OS=Morus notabilis GN=L484_023404 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007810_130 0.0 - - PREDICTED: ankyrin-1-like [Prunus mume]
2 Hb_000414_100 0.1494998393 - - PREDICTED: uncharacterized protein LOC105643784 [Jatropha curcas]
3 Hb_001031_020 0.1501745683 - - hypothetical protein VITISV_000631 [Vitis vinifera]
4 Hb_116349_050 0.161816406 - - formin homology 2 domain-containing family protein [Populus trichocarpa]
5 Hb_000398_200 0.1657765673 - - PREDICTED: uncharacterized protein LOC105631579 [Jatropha curcas]
6 Hb_000119_050 0.1686149067 - - PREDICTED: transmembrane protein 45B-like [Jatropha curcas]
7 Hb_000117_110 0.1768098948 - - transferase, putative [Ricinus communis]
8 Hb_054886_010 0.1776591326 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000625_040 0.1782319472 - - PREDICTED: pathogenesis-related protein 5-like [Jatropha curcas]
10 Hb_005081_060 0.1842442871 - - hypothetical protein EUGRSUZ_C00833 [Eucalyptus grandis]
11 Hb_000039_100 0.1842954707 - - PREDICTED: uncharacterized protein LOC105649440 [Jatropha curcas]
12 Hb_001274_040 0.1865938854 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
13 Hb_000767_040 0.1879149168 - - cytochrome P450, putative [Ricinus communis]
14 Hb_009252_140 0.1899530563 - - Spotted leaf protein, putative [Ricinus communis]
15 Hb_007305_040 0.1908664512 - - Nodulin-26, putative [Ricinus communis]
16 Hb_003376_150 0.1925768152 - - PREDICTED: peroxidase 21 [Jatropha curcas]
17 Hb_041290_030 0.1945501719 - - PREDICTED: uncharacterized protein LOC105640874 [Jatropha curcas]
18 Hb_001677_130 0.1957719978 - - hypothetical protein POPTR_0081s002101g, partial [Populus trichocarpa]
19 Hb_001437_200 0.1957845342 - - PREDICTED: UDP-glycosyltransferase 86A2 [Jatropha curcas]
20 Hb_004162_030 0.2005962364 - - PREDICTED: lysosomal Pro-X carboxypeptidase-like [Jatropha curcas]

Gene co-expression network

sample Hb_007810_130 Hb_007810_130 Hb_000414_100 Hb_000414_100 Hb_007810_130--Hb_000414_100 Hb_001031_020 Hb_001031_020 Hb_007810_130--Hb_001031_020 Hb_116349_050 Hb_116349_050 Hb_007810_130--Hb_116349_050 Hb_000398_200 Hb_000398_200 Hb_007810_130--Hb_000398_200 Hb_000119_050 Hb_000119_050 Hb_007810_130--Hb_000119_050 Hb_000117_110 Hb_000117_110 Hb_007810_130--Hb_000117_110 Hb_033153_010 Hb_033153_010 Hb_000414_100--Hb_033153_010 Hb_011671_290 Hb_011671_290 Hb_000414_100--Hb_011671_290 Hb_174829_040 Hb_174829_040 Hb_000414_100--Hb_174829_040 Hb_000414_100--Hb_116349_050 Hb_001437_200 Hb_001437_200 Hb_000414_100--Hb_001437_200 Hb_002572_060 Hb_002572_060 Hb_000414_100--Hb_002572_060 Hb_000563_380 Hb_000563_380 Hb_001031_020--Hb_000563_380 Hb_028487_080 Hb_028487_080 Hb_001031_020--Hb_028487_080 Hb_008931_020 Hb_008931_020 Hb_001031_020--Hb_008931_020 Hb_000635_170 Hb_000635_170 Hb_001031_020--Hb_000635_170 Hb_004108_200 Hb_004108_200 Hb_001031_020--Hb_004108_200 Hb_004162_030 Hb_004162_030 Hb_001031_020--Hb_004162_030 Hb_000172_300 Hb_000172_300 Hb_116349_050--Hb_000172_300 Hb_116349_050--Hb_174829_040 Hb_002042_190 Hb_002042_190 Hb_116349_050--Hb_002042_190 Hb_048653_040 Hb_048653_040 Hb_116349_050--Hb_048653_040 Hb_000039_100 Hb_000039_100 Hb_116349_050--Hb_000039_100 Hb_001677_130 Hb_001677_130 Hb_000398_200--Hb_001677_130 Hb_000398_200--Hb_000117_110 Hb_004712_140 Hb_004712_140 Hb_000398_200--Hb_004712_140 Hb_003376_150 Hb_003376_150 Hb_000398_200--Hb_003376_150 Hb_007328_010 Hb_007328_010 Hb_000398_200--Hb_007328_010 Hb_011925_010 Hb_011925_010 Hb_000398_200--Hb_011925_010 Hb_001850_010 Hb_001850_010 Hb_000119_050--Hb_001850_010 Hb_001274_040 Hb_001274_040 Hb_000119_050--Hb_001274_040 Hb_000767_040 Hb_000767_040 Hb_000119_050--Hb_000767_040 Hb_030873_010 Hb_030873_010 Hb_000119_050--Hb_030873_010 Hb_000111_130 Hb_000111_130 Hb_000119_050--Hb_000111_130 Hb_005081_060 Hb_005081_060 Hb_000119_050--Hb_005081_060 Hb_000117_110--Hb_001677_130 Hb_000117_110--Hb_004712_140 Hb_010327_010 Hb_010327_010 Hb_000117_110--Hb_010327_010 Hb_002218_060 Hb_002218_060 Hb_000117_110--Hb_002218_060 Hb_091913_010 Hb_091913_010 Hb_000117_110--Hb_091913_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.392994 0.00535123 0.0468959 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0163941 0 0 0.0153612 0.0274631

CAGE analysis