Hb_011671_290

Information

Type transcription factor
Description TF Family: ERF
Location Contig11671: 256633-257406
Sequence    

Annotation

kegg
ID pop:POPTR_0003s15040g
description ethylene-responsive element-binding family protein
nr
ID KDP22468.1
description hypothetical protein JCGZ_26299 [Jatropha curcas]
swissprot
ID Q8VY90
description Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1
trembl
ID A0A067JI28
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26299 PE=4 SV=1
Gene Ontology
ID GO:0008152
description ethylene-responsive transcription factor erf105-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05170: 256727-257503
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011671_290 0.0 transcription factor TF Family: ERF hypothetical protein JCGZ_26299 [Jatropha curcas]
2 Hb_000610_030 0.0688229142 - - hypothetical protein MIMGU_mgv1a0038491mg, partial [Erythranthe guttata]
3 Hb_002572_060 0.079862713 - - conserved hypothetical protein [Ricinus communis]
4 Hb_008931_020 0.0989087978 - - Receptor like protein 46, putative [Theobroma cacao]
5 Hb_000959_290 0.1066577242 - - PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
6 Hb_000414_100 0.1069475222 - - PREDICTED: uncharacterized protein LOC105643784 [Jatropha curcas]
7 Hb_004994_070 0.1122231687 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
8 Hb_013726_100 0.1147621949 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
9 Hb_093204_010 0.119278722 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004767_040 0.1193423342 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
11 Hb_033153_010 0.1200314629 - - PREDICTED: MLO-like protein 12 [Jatropha curcas]
12 Hb_011805_060 0.1200394851 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
13 Hb_000563_460 0.1218630098 - - PREDICTED: RING-H2 finger protein ATL2 [Jatropha curcas]
14 Hb_002311_490 0.1246628318 - - PREDICTED: RING-H2 finger protein ATL2 [Jatropha curcas]
15 Hb_002475_110 0.1250744612 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
16 Hb_006519_010 0.1251185974 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At4g27220 [Vitis vinifera]
17 Hb_000635_170 0.1296252678 - - cytochrome P450, putative [Ricinus communis]
18 Hb_011111_010 0.1299015859 - - PREDICTED: putative RING-H2 finger protein ATL21A [Jatropha curcas]
19 Hb_027214_060 0.1331204727 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
20 Hb_000563_380 0.1332444326 - - hypothetical protein CICLE_v10007206mg [Citrus clementina]

Gene co-expression network

sample Hb_011671_290 Hb_011671_290 Hb_000610_030 Hb_000610_030 Hb_011671_290--Hb_000610_030 Hb_002572_060 Hb_002572_060 Hb_011671_290--Hb_002572_060 Hb_008931_020 Hb_008931_020 Hb_011671_290--Hb_008931_020 Hb_000959_290 Hb_000959_290 Hb_011671_290--Hb_000959_290 Hb_000414_100 Hb_000414_100 Hb_011671_290--Hb_000414_100 Hb_004994_070 Hb_004994_070 Hb_011671_290--Hb_004994_070 Hb_000610_030--Hb_002572_060 Hb_013726_100 Hb_013726_100 Hb_000610_030--Hb_013726_100 Hb_000256_050 Hb_000256_050 Hb_000610_030--Hb_000256_050 Hb_002475_110 Hb_002475_110 Hb_000610_030--Hb_002475_110 Hb_001623_020 Hb_001623_020 Hb_000610_030--Hb_001623_020 Hb_002572_060--Hb_000959_290 Hb_002572_060--Hb_013726_100 Hb_093204_010 Hb_093204_010 Hb_002572_060--Hb_093204_010 Hb_002572_060--Hb_004994_070 Hb_000563_380 Hb_000563_380 Hb_008931_020--Hb_000563_380 Hb_000635_170 Hb_000635_170 Hb_008931_020--Hb_000635_170 Hb_008931_020--Hb_000959_290 Hb_000045_110 Hb_000045_110 Hb_008931_020--Hb_000045_110 Hb_008931_020--Hb_002572_060 Hb_006519_010 Hb_006519_010 Hb_000959_290--Hb_006519_010 Hb_000959_290--Hb_004994_070 Hb_001190_020 Hb_001190_020 Hb_000959_290--Hb_001190_020 Hb_000959_290--Hb_093204_010 Hb_000333_150 Hb_000333_150 Hb_000959_290--Hb_000333_150 Hb_033153_010 Hb_033153_010 Hb_000414_100--Hb_033153_010 Hb_174829_040 Hb_174829_040 Hb_000414_100--Hb_174829_040 Hb_116349_050 Hb_116349_050 Hb_000414_100--Hb_116349_050 Hb_001437_200 Hb_001437_200 Hb_000414_100--Hb_001437_200 Hb_000414_100--Hb_002572_060 Hb_004994_070--Hb_006519_010 Hb_004994_070--Hb_093204_010 Hb_004994_070--Hb_000333_150 Hb_011111_010 Hb_011111_010 Hb_004994_070--Hb_011111_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.06044 540.711 17.0637 51.354 2.05969 2.778
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.63475 0.720892 1.79995 1.10112 5.43602

CAGE analysis