Hb_093204_010

Information

Type -
Description -
Location Contig93204: 78-442
Sequence    

Annotation

kegg
ID rcu:RCOM_0962050
description hypothetical protein
nr
ID XP_002524345.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID F4I1H5
description Auxin-responsive protein SAUR63 OS=Arabidopsis thaliana GN=SAUR63 PE=2 SV=1
trembl
ID B9SEC6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0962050 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_093204_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_011111_010 0.0578326271 - - PREDICTED: putative RING-H2 finger protein ATL21A [Jatropha curcas]
3 Hb_004994_070 0.0608834285 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
4 Hb_000959_290 0.0730562942 - - PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
5 Hb_006519_010 0.0740644838 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At4g27220 [Vitis vinifera]
6 Hb_004767_040 0.0791322567 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
7 Hb_002572_060 0.0801095821 - - conserved hypothetical protein [Ricinus communis]
8 Hb_143232_020 0.0891830156 - - hypothetical protein JCGZ_20467 [Jatropha curcas]
9 Hb_000333_150 0.0899365511 - - hypothetical protein RCOM_0711500 [Ricinus communis]
10 Hb_000261_540 0.0928858 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Jatropha curcas]
11 Hb_001623_020 0.0951977503 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
12 Hb_000256_050 0.0994334494 - - chitinase, putative [Ricinus communis]
13 Hb_000336_170 0.1018735031 - - Polcalcin Jun o, putative [Ricinus communis]
14 Hb_009897_030 0.1114989041 - - -
15 Hb_120917_010 0.1126212138 - - PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]
16 Hb_000610_030 0.1149898589 - - hypothetical protein MIMGU_mgv1a0038491mg, partial [Erythranthe guttata]
17 Hb_013726_100 0.1154376522 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
18 Hb_073423_010 0.1162098773 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_001190_020 0.1163839022 - - ankyrin repeat-containing protein, putative [Ricinus communis]
20 Hb_039757_010 0.1171024113 - - -

Gene co-expression network

sample Hb_093204_010 Hb_093204_010 Hb_011111_010 Hb_011111_010 Hb_093204_010--Hb_011111_010 Hb_004994_070 Hb_004994_070 Hb_093204_010--Hb_004994_070 Hb_000959_290 Hb_000959_290 Hb_093204_010--Hb_000959_290 Hb_006519_010 Hb_006519_010 Hb_093204_010--Hb_006519_010 Hb_004767_040 Hb_004767_040 Hb_093204_010--Hb_004767_040 Hb_002572_060 Hb_002572_060 Hb_093204_010--Hb_002572_060 Hb_143232_020 Hb_143232_020 Hb_011111_010--Hb_143232_020 Hb_073423_010 Hb_073423_010 Hb_011111_010--Hb_073423_010 Hb_004117_360 Hb_004117_360 Hb_011111_010--Hb_004117_360 Hb_002486_030 Hb_002486_030 Hb_011111_010--Hb_002486_030 Hb_008579_010 Hb_008579_010 Hb_011111_010--Hb_008579_010 Hb_004994_070--Hb_006519_010 Hb_004994_070--Hb_000959_290 Hb_000333_150 Hb_000333_150 Hb_004994_070--Hb_000333_150 Hb_004994_070--Hb_011111_010 Hb_004994_070--Hb_002572_060 Hb_000959_290--Hb_006519_010 Hb_001190_020 Hb_001190_020 Hb_000959_290--Hb_001190_020 Hb_000959_290--Hb_002572_060 Hb_000959_290--Hb_000333_150 Hb_006519_010--Hb_001190_020 Hb_006519_010--Hb_004767_040 Hb_006519_010--Hb_002572_060 Hb_039757_010 Hb_039757_010 Hb_004767_040--Hb_039757_010 Hb_001405_180 Hb_001405_180 Hb_004767_040--Hb_001405_180 Hb_009897_030 Hb_009897_030 Hb_004767_040--Hb_009897_030 Hb_000426_060 Hb_000426_060 Hb_004767_040--Hb_000426_060 Hb_002851_050 Hb_002851_050 Hb_004767_040--Hb_002851_050 Hb_000610_030 Hb_000610_030 Hb_002572_060--Hb_000610_030 Hb_013726_100 Hb_013726_100 Hb_002572_060--Hb_013726_100 Hb_011671_290 Hb_011671_290 Hb_002572_060--Hb_011671_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 38.1917 1.02594 2.83582 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis