Hb_000959_290

Information

Type -
Description -
Location Contig959: 259561-259899
Sequence    

Annotation

kegg
ID rcu:RCOM_0157540
description hypothetical protein
nr
ID XP_012075291.1
description PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KGF9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09460 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000959_290 0.0 - - PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
2 Hb_006519_010 0.0529408218 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At4g27220 [Vitis vinifera]
3 Hb_004994_070 0.0613563369 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
4 Hb_001190_020 0.0676525196 - - ankyrin repeat-containing protein, putative [Ricinus communis]
5 Hb_002572_060 0.070922714 - - conserved hypothetical protein [Ricinus communis]
6 Hb_093204_010 0.0730562942 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000333_150 0.0849753325 - - hypothetical protein RCOM_0711500 [Ricinus communis]
8 Hb_011111_010 0.0943590208 - - PREDICTED: putative RING-H2 finger protein ATL21A [Jatropha curcas]
9 Hb_004767_040 0.0981791785 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
10 Hb_000336_170 0.1044129292 - - Polcalcin Jun o, putative [Ricinus communis]
11 Hb_011671_290 0.1066577242 transcription factor TF Family: ERF hypothetical protein JCGZ_26299 [Jatropha curcas]
12 Hb_078477_010 0.1075909748 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
13 Hb_000261_540 0.1135225725 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Jatropha curcas]
14 Hb_033153_010 0.1155295668 - - PREDICTED: MLO-like protein 12 [Jatropha curcas]
15 Hb_005648_030 0.1169365117 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH18-like [Jatropha curcas]
16 Hb_008931_020 0.1174997112 - - Receptor like protein 46, putative [Theobroma cacao]
17 Hb_143232_020 0.1185002633 - - hypothetical protein JCGZ_20467 [Jatropha curcas]
18 Hb_027913_010 0.119525909 - - ankyrin repeat-containing protein, putative [Ricinus communis]
19 Hb_022630_010 0.1197251098 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
20 Hb_000610_030 0.1201306838 - - hypothetical protein MIMGU_mgv1a0038491mg, partial [Erythranthe guttata]

Gene co-expression network

sample Hb_000959_290 Hb_000959_290 Hb_006519_010 Hb_006519_010 Hb_000959_290--Hb_006519_010 Hb_004994_070 Hb_004994_070 Hb_000959_290--Hb_004994_070 Hb_001190_020 Hb_001190_020 Hb_000959_290--Hb_001190_020 Hb_002572_060 Hb_002572_060 Hb_000959_290--Hb_002572_060 Hb_093204_010 Hb_093204_010 Hb_000959_290--Hb_093204_010 Hb_000333_150 Hb_000333_150 Hb_000959_290--Hb_000333_150 Hb_006519_010--Hb_001190_020 Hb_006519_010--Hb_004994_070 Hb_006519_010--Hb_093204_010 Hb_004767_040 Hb_004767_040 Hb_006519_010--Hb_004767_040 Hb_006519_010--Hb_002572_060 Hb_004994_070--Hb_093204_010 Hb_004994_070--Hb_000333_150 Hb_011111_010 Hb_011111_010 Hb_004994_070--Hb_011111_010 Hb_004994_070--Hb_002572_060 Hb_010368_040 Hb_010368_040 Hb_001190_020--Hb_010368_040 Hb_027913_010 Hb_027913_010 Hb_001190_020--Hb_027913_010 Hb_004059_010 Hb_004059_010 Hb_001190_020--Hb_004059_010 Hb_001190_020--Hb_004994_070 Hb_000610_030 Hb_000610_030 Hb_002572_060--Hb_000610_030 Hb_013726_100 Hb_013726_100 Hb_002572_060--Hb_013726_100 Hb_011671_290 Hb_011671_290 Hb_002572_060--Hb_011671_290 Hb_002572_060--Hb_093204_010 Hb_093204_010--Hb_011111_010 Hb_093204_010--Hb_004767_040 Hb_008978_010 Hb_008978_010 Hb_000333_150--Hb_008978_010 Hb_044026_010 Hb_044026_010 Hb_000333_150--Hb_044026_010 Hb_078477_010 Hb_078477_010 Hb_000333_150--Hb_078477_010 Hb_000333_150--Hb_093204_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 90.6581 2.30782 6.28914 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.691923 0.362635

CAGE analysis