Hb_004059_010

Information

Type -
Description -
Location Contig4059: 8942-15851
Sequence    

Annotation

kegg
ID cit:102617910
description ankyrin-3-like
nr
ID XP_012066879.1
description PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
swissprot
ID Q6AWW5
description Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1
trembl
ID A0A067L515
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01622 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40244: 9178-15654
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004059_010 0.0 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
2 Hb_000215_120 0.078301626 - - PREDICTED: putative ABC transporter B family member 8 [Jatropha curcas]
3 Hb_010368_040 0.0879540229 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001796_010 0.093061417 - - purine transporter, putative [Ricinus communis]
5 Hb_001190_020 0.0934510604 - - ankyrin repeat-containing protein, putative [Ricinus communis]
6 Hb_000879_100 0.1012763193 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
7 Hb_006519_010 0.1069218358 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At4g27220 [Vitis vinifera]
8 Hb_007943_040 0.1086400353 - - hypothetical protein JCGZ_07271 [Jatropha curcas]
9 Hb_000016_290 0.1094408849 - - multidrug resistance pump, putative [Ricinus communis]
10 Hb_186671_020 0.1099065839 - - ankyrin repeat-containing protein, putative [Ricinus communis]
11 Hb_000336_170 0.1141787287 - - Polcalcin Jun o, putative [Ricinus communis]
12 Hb_011980_020 0.1143206968 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_078477_010 0.1143730279 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
14 Hb_163950_060 0.1148140349 - - multidrug resistance pump, putative [Ricinus communis]
15 Hb_009897_030 0.1187032067 - - -
16 Hb_013057_010 0.1233427609 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 43-like [Jatropha curcas]
17 Hb_000333_150 0.1246549582 - - hypothetical protein RCOM_0711500 [Ricinus communis]
18 Hb_000261_540 0.1251481875 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Jatropha curcas]
19 Hb_018609_010 0.1277094866 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000959_290 0.1278303044 - - PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]

Gene co-expression network

sample Hb_004059_010 Hb_004059_010 Hb_000215_120 Hb_000215_120 Hb_004059_010--Hb_000215_120 Hb_010368_040 Hb_010368_040 Hb_004059_010--Hb_010368_040 Hb_001796_010 Hb_001796_010 Hb_004059_010--Hb_001796_010 Hb_001190_020 Hb_001190_020 Hb_004059_010--Hb_001190_020 Hb_000879_100 Hb_000879_100 Hb_004059_010--Hb_000879_100 Hb_006519_010 Hb_006519_010 Hb_004059_010--Hb_006519_010 Hb_000016_290 Hb_000016_290 Hb_000215_120--Hb_000016_290 Hb_000215_120--Hb_001796_010 Hb_186671_020 Hb_186671_020 Hb_000215_120--Hb_186671_020 Hb_005687_020 Hb_005687_020 Hb_000215_120--Hb_005687_020 Hb_018609_010 Hb_018609_010 Hb_000215_120--Hb_018609_010 Hb_010368_040--Hb_001190_020 Hb_010368_040--Hb_006519_010 Hb_039757_010 Hb_039757_010 Hb_010368_040--Hb_039757_010 Hb_001405_180 Hb_001405_180 Hb_010368_040--Hb_001405_180 Hb_009897_030 Hb_009897_030 Hb_010368_040--Hb_009897_030 Hb_001796_010--Hb_186671_020 Hb_001796_010--Hb_018609_010 Hb_099085_010 Hb_099085_010 Hb_001796_010--Hb_099085_010 Hb_064583_010 Hb_064583_010 Hb_001796_010--Hb_064583_010 Hb_011980_020 Hb_011980_020 Hb_001796_010--Hb_011980_020 Hb_163950_060 Hb_163950_060 Hb_001796_010--Hb_163950_060 Hb_001190_020--Hb_006519_010 Hb_000959_290 Hb_000959_290 Hb_001190_020--Hb_000959_290 Hb_027913_010 Hb_027913_010 Hb_001190_020--Hb_027913_010 Hb_004994_070 Hb_004994_070 Hb_001190_020--Hb_004994_070 Hb_005643_010 Hb_005643_010 Hb_000879_100--Hb_005643_010 Hb_119441_010 Hb_119441_010 Hb_000879_100--Hb_119441_010 Hb_000369_150 Hb_000369_150 Hb_000879_100--Hb_000369_150 Hb_001331_050 Hb_001331_050 Hb_000879_100--Hb_001331_050 Hb_066262_010 Hb_066262_010 Hb_000879_100--Hb_066262_010 Hb_003847_140 Hb_003847_140 Hb_000879_100--Hb_003847_140 Hb_006519_010--Hb_000959_290 Hb_006519_010--Hb_004994_070 Hb_093204_010 Hb_093204_010 Hb_006519_010--Hb_093204_010 Hb_004767_040 Hb_004767_040 Hb_006519_010--Hb_004767_040 Hb_002572_060 Hb_002572_060 Hb_006519_010--Hb_002572_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 46.2023 0.058017 1.80876 0.0232584 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.06452 0

CAGE analysis