Hb_039757_010

Information

Type -
Description -
Location Contig39757: 586-1055
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_039757_010 0.0 - - -
2 Hb_001405_180 0.0039720519 - - zinc finger protein, putative [Ricinus communis]
3 Hb_000426_060 0.0292904151 - - hypothetical protein CISIN_1g048192mg, partial [Citrus sinensis]
4 Hb_002851_050 0.0379141222 transcription factor TF Family: MYB-related myb family transcription factor family protein [Populus trichocarpa]
5 Hb_000994_090 0.0447905479 - - PREDICTED: putative indole-3-acetic acid-amido synthetase GH3.9 [Jatropha curcas]
6 Hb_009897_030 0.0489620243 - - -
7 Hb_000426_070 0.0494740349 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
8 Hb_000592_040 0.0503271692 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000499_050 0.06063753 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
10 Hb_004767_040 0.06834081 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
11 Hb_001693_030 0.0799375249 - - PREDICTED: reticuline oxidase-like [Jatropha curcas]
12 Hb_007943_040 0.0901525277 - - hypothetical protein JCGZ_07271 [Jatropha curcas]
13 Hb_117335_020 0.0919971475 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
14 Hb_010368_040 0.0951235617 - - conserved hypothetical protein [Ricinus communis]
15 Hb_013057_010 0.1048395708 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 43-like [Jatropha curcas]
16 Hb_023675_020 0.1097660664 - - acc synthase, putative [Ricinus communis]
17 Hb_006519_010 0.1151876664 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At4g27220 [Vitis vinifera]
18 Hb_000261_540 0.1154349424 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Jatropha curcas]
19 Hb_093204_010 0.1171024113 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000336_170 0.1220271818 - - Polcalcin Jun o, putative [Ricinus communis]

Gene co-expression network

sample Hb_039757_010 Hb_039757_010 Hb_001405_180 Hb_001405_180 Hb_039757_010--Hb_001405_180 Hb_000426_060 Hb_000426_060 Hb_039757_010--Hb_000426_060 Hb_002851_050 Hb_002851_050 Hb_039757_010--Hb_002851_050 Hb_000994_090 Hb_000994_090 Hb_039757_010--Hb_000994_090 Hb_009897_030 Hb_009897_030 Hb_039757_010--Hb_009897_030 Hb_000426_070 Hb_000426_070 Hb_039757_010--Hb_000426_070 Hb_001405_180--Hb_000426_060 Hb_001405_180--Hb_002851_050 Hb_001405_180--Hb_000994_090 Hb_001405_180--Hb_000426_070 Hb_000592_040 Hb_000592_040 Hb_001405_180--Hb_000592_040 Hb_000426_060--Hb_002851_050 Hb_000426_060--Hb_000994_090 Hb_000426_060--Hb_000426_070 Hb_000426_060--Hb_000592_040 Hb_002851_050--Hb_000994_090 Hb_002851_050--Hb_000426_070 Hb_002851_050--Hb_000592_040 Hb_000499_050 Hb_000499_050 Hb_002851_050--Hb_000499_050 Hb_000994_090--Hb_000426_070 Hb_000994_090--Hb_000592_040 Hb_000994_090--Hb_000499_050 Hb_007943_040 Hb_007943_040 Hb_009897_030--Hb_007943_040 Hb_009897_030--Hb_001405_180 Hb_004767_040 Hb_004767_040 Hb_009897_030--Hb_004767_040 Hb_009897_030--Hb_000426_060 Hb_011980_020 Hb_011980_020 Hb_009897_030--Hb_011980_020 Hb_000426_070--Hb_000592_040 Hb_000426_070--Hb_000499_050 Hb_117335_020 Hb_117335_020 Hb_000426_070--Hb_117335_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.91128 0 0.196814 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis