Hb_007943_040

Information

Type -
Description -
Location Contig7943: 57770-59922
Sequence    

Annotation

kegg
ID rcu:RCOM_1052050
description nitrate transporter, putative
nr
ID KDP33700.1
description hypothetical protein JCGZ_07271 [Jatropha curcas]
swissprot
ID Q8LPL2
description Protein NRT1/ PTR FAMILY 1.1 OS=Arabidopsis thaliana GN=NPF1.1 PE=1 SV=2
trembl
ID A0A067KN68
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07271 PE=4 SV=1
Gene Ontology
ID GO:0016021
description protein nrt1 ptr family -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007943_040 0.0 - - hypothetical protein JCGZ_07271 [Jatropha curcas]
2 Hb_009897_030 0.0416568185 - - -
3 Hb_011980_020 0.0434591542 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_163950_060 0.0641449905 - - multidrug resistance pump, putative [Ricinus communis]
5 Hb_000336_170 0.0714720012 - - Polcalcin Jun o, putative [Ricinus communis]
6 Hb_000261_540 0.0794734342 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Jatropha curcas]
7 Hb_013057_010 0.0894552105 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 43-like [Jatropha curcas]
8 Hb_039757_010 0.0901525277 - - -
9 Hb_001405_180 0.0940521216 - - zinc finger protein, putative [Ricinus communis]
10 Hb_027556_080 0.0966112244 - - PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 [Jatropha curcas]
11 Hb_005687_020 0.1012860719 - - P66 protein [Hevea brasiliensis]
12 Hb_004767_040 0.1018256059 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
13 Hb_008978_010 0.1021790532 - - transmembrane receptor, putative [Ricinus communis]
14 Hb_001796_010 0.1078103929 - - purine transporter, putative [Ricinus communis]
15 Hb_004059_010 0.1086400353 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
16 Hb_001985_010 0.1120482179 - - conserved hypothetical protein [Ricinus communis]
17 Hb_186671_020 0.1156921983 - - ankyrin repeat-containing protein, putative [Ricinus communis]
18 Hb_000426_060 0.1188167213 - - hypothetical protein CISIN_1g048192mg, partial [Citrus sinensis]
19 Hb_010368_040 0.1208142208 - - conserved hypothetical protein [Ricinus communis]
20 Hb_093204_010 0.1227513749 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007943_040 Hb_007943_040 Hb_009897_030 Hb_009897_030 Hb_007943_040--Hb_009897_030 Hb_011980_020 Hb_011980_020 Hb_007943_040--Hb_011980_020 Hb_163950_060 Hb_163950_060 Hb_007943_040--Hb_163950_060 Hb_000336_170 Hb_000336_170 Hb_007943_040--Hb_000336_170 Hb_000261_540 Hb_000261_540 Hb_007943_040--Hb_000261_540 Hb_013057_010 Hb_013057_010 Hb_007943_040--Hb_013057_010 Hb_039757_010 Hb_039757_010 Hb_009897_030--Hb_039757_010 Hb_001405_180 Hb_001405_180 Hb_009897_030--Hb_001405_180 Hb_004767_040 Hb_004767_040 Hb_009897_030--Hb_004767_040 Hb_000426_060 Hb_000426_060 Hb_009897_030--Hb_000426_060 Hb_009897_030--Hb_011980_020 Hb_011980_020--Hb_163950_060 Hb_005687_020 Hb_005687_020 Hb_011980_020--Hb_005687_020 Hb_011980_020--Hb_000336_170 Hb_001796_010 Hb_001796_010 Hb_011980_020--Hb_001796_010 Hb_008978_010 Hb_008978_010 Hb_011980_020--Hb_008978_010 Hb_163950_060--Hb_000336_170 Hb_163950_060--Hb_008978_010 Hb_186671_020 Hb_186671_020 Hb_163950_060--Hb_186671_020 Hb_163950_060--Hb_005687_020 Hb_000336_170--Hb_000261_540 Hb_000336_170--Hb_008978_010 Hb_000336_170--Hb_009897_030 Hb_000261_540--Hb_009897_030 Hb_000261_540--Hb_008978_010 Hb_000261_540--Hb_163950_060 Hb_000261_540--Hb_004767_040 Hb_005588_150 Hb_005588_150 Hb_013057_010--Hb_005588_150 Hb_013057_010--Hb_009897_030 Hb_013057_010--Hb_004767_040 Hb_013057_010--Hb_000336_170 Hb_013057_010--Hb_000261_540
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.188321 0 0.00803003 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis