Hb_117335_020

Information

Type -
Description -
Location Contig117335: 7470-9773
Sequence    

Annotation

kegg
ID vvi:100265616
description LRR receptor-like serine/threonine-protein kinase FLS2
nr
ID KDP35941.1
description hypothetical protein JCGZ_09913 [Jatropha curcas]
swissprot
ID Q9FL28
description LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1
trembl
ID A0A067KI84
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09913 PE=4 SV=1
Gene Ontology
ID GO:0005515
description lrr receptor-like serine threonine-protein kinase fls2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_117335_020 0.0 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
2 Hb_023675_020 0.0179595843 - - acc synthase, putative [Ricinus communis]
3 Hb_000499_050 0.0315659079 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
4 Hb_000592_040 0.0419026038 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000103_280 0.0425753458 transcription factor TF Family: HSF Heat shock factor protein HSF30, putative [Ricinus communis]
6 Hb_000426_070 0.0427569081 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
7 Hb_001693_030 0.0457505963 - - PREDICTED: reticuline oxidase-like [Jatropha curcas]
8 Hb_000994_090 0.0474439738 - - PREDICTED: putative indole-3-acetic acid-amido synthetase GH3.9 [Jatropha curcas]
9 Hb_010615_010 0.0478900127 - - PREDICTED: reticuline oxidase-like protein [Jatropha curcas]
10 Hb_001784_010 0.053391871 - - nutrient reservoir, putative [Ricinus communis]
11 Hb_002851_050 0.0543166949 transcription factor TF Family: MYB-related myb family transcription factor family protein [Populus trichocarpa]
12 Hb_008296_010 0.0548747835 - - -
13 Hb_009230_050 0.0602662947 - - PREDICTED: transcription factor bHLH113-like [Jatropha curcas]
14 Hb_000426_060 0.0629200167 - - hypothetical protein CISIN_1g048192mg, partial [Citrus sinensis]
15 Hb_070850_010 0.0820774973 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 1B-like [Jatropha curcas]
16 Hb_007556_010 0.0831013425 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X2 [Populus euphratica]
17 Hb_003938_150 0.0847299788 - - hypothetical protein JCGZ_17711 [Jatropha curcas]
18 Hb_001405_180 0.0880680245 - - zinc finger protein, putative [Ricinus communis]
19 Hb_039757_010 0.0919971475 - - -
20 Hb_013862_010 0.0979006533 - - PREDICTED: uncharacterized protein LOC105650642 [Jatropha curcas]

Gene co-expression network

sample Hb_117335_020 Hb_117335_020 Hb_023675_020 Hb_023675_020 Hb_117335_020--Hb_023675_020 Hb_000499_050 Hb_000499_050 Hb_117335_020--Hb_000499_050 Hb_000592_040 Hb_000592_040 Hb_117335_020--Hb_000592_040 Hb_000103_280 Hb_000103_280 Hb_117335_020--Hb_000103_280 Hb_000426_070 Hb_000426_070 Hb_117335_020--Hb_000426_070 Hb_001693_030 Hb_001693_030 Hb_117335_020--Hb_001693_030 Hb_023675_020--Hb_000103_280 Hb_010615_010 Hb_010615_010 Hb_023675_020--Hb_010615_010 Hb_001784_010 Hb_001784_010 Hb_023675_020--Hb_001784_010 Hb_008296_010 Hb_008296_010 Hb_023675_020--Hb_008296_010 Hb_009230_050 Hb_009230_050 Hb_023675_020--Hb_009230_050 Hb_000499_050--Hb_000592_040 Hb_000499_050--Hb_000426_070 Hb_000994_090 Hb_000994_090 Hb_000499_050--Hb_000994_090 Hb_002851_050 Hb_002851_050 Hb_000499_050--Hb_002851_050 Hb_000426_060 Hb_000426_060 Hb_000499_050--Hb_000426_060 Hb_000592_040--Hb_000426_070 Hb_000592_040--Hb_000994_090 Hb_000592_040--Hb_002851_050 Hb_000592_040--Hb_000426_060 Hb_000103_280--Hb_010615_010 Hb_000103_280--Hb_001784_010 Hb_000103_280--Hb_008296_010 Hb_000103_280--Hb_009230_050 Hb_070850_010 Hb_070850_010 Hb_000103_280--Hb_070850_010 Hb_000426_070--Hb_000994_090 Hb_000426_070--Hb_002851_050 Hb_000426_070--Hb_000426_060 Hb_001693_030--Hb_000499_050 Hb_001693_030--Hb_000592_040 Hb_001693_030--Hb_000426_070 Hb_001693_030--Hb_000994_090 Hb_001693_030--Hb_002851_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0603366 0 0.0119817 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis