Hb_003376_150

Information

Type -
Description -
Location Contig3376: 113004-114724
Sequence    

Annotation

kegg
ID pop:POPTR_0006s13190g
description Peroxidase 21 precursor family protein
nr
ID XP_012082319.1
description PREDICTED: peroxidase 21 [Jatropha curcas]
swissprot
ID Q42580
description Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1
trembl
ID A0A067JYQ4
description Peroxidase OS=Jatropha curcas GN=JCGZ_16485 PE=3 SV=1
Gene Ontology
ID GO:0005829
description peroxidase 21

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003376_150 0.0 - - PREDICTED: peroxidase 21 [Jatropha curcas]
2 Hb_006052_040 0.1135428875 - - pyruvate decarboxylase [Hevea brasiliensis]
3 Hb_000398_200 0.114426621 - - PREDICTED: uncharacterized protein LOC105631579 [Jatropha curcas]
4 Hb_000625_040 0.1147950303 - - PREDICTED: pathogenesis-related protein 5-like [Jatropha curcas]
5 Hb_009786_010 0.1211296307 - - Phosphoprotein phosphatase [Theobroma cacao]
6 Hb_166155_010 0.1215864087 - - PREDICTED: metalloendoproteinase 1 [Jatropha curcas]
7 Hb_005048_080 0.1227540889 - - PREDICTED: PAP-specific phosphatase HAL2-like [Jatropha curcas]
8 Hb_030370_070 0.1324161795 - - ATP binding protein, putative [Ricinus communis]
9 Hb_003176_020 0.1345177901 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]
10 Hb_008550_030 0.1351935115 - - PREDICTED: tonoplast dicarboxylate transporter [Jatropha curcas]
11 Hb_000117_110 0.1460985637 - - transferase, putative [Ricinus communis]
12 Hb_001677_130 0.1478897035 - - hypothetical protein POPTR_0081s002101g, partial [Populus trichocarpa]
13 Hb_000029_180 0.1526853512 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
14 Hb_004122_020 0.1526911786 transcription factor TF Family: ERF ERF/AP2 domain-containing transcription factor [Manihot esculenta]
15 Hb_007305_040 0.1531340544 - - Nodulin-26, putative [Ricinus communis]
16 Hb_002267_030 0.1542250112 - - hypothetical protein JCGZ_24883 [Jatropha curcas]
17 Hb_002218_060 0.1548673979 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000286_180 0.1548960435 - - PREDICTED: dnaJ homolog subfamily B member 4 [Jatropha curcas]
19 Hb_011925_010 0.1601499233 - - PREDICTED: putative disease resistance protein RGA1 isoform X1 [Jatropha curcas]
20 Hb_002475_010 0.1609395769 - - hypothetical protein JCGZ_22530 [Jatropha curcas]

Gene co-expression network

sample Hb_003376_150 Hb_003376_150 Hb_006052_040 Hb_006052_040 Hb_003376_150--Hb_006052_040 Hb_000398_200 Hb_000398_200 Hb_003376_150--Hb_000398_200 Hb_000625_040 Hb_000625_040 Hb_003376_150--Hb_000625_040 Hb_009786_010 Hb_009786_010 Hb_003376_150--Hb_009786_010 Hb_166155_010 Hb_166155_010 Hb_003376_150--Hb_166155_010 Hb_005048_080 Hb_005048_080 Hb_003376_150--Hb_005048_080 Hb_006198_060 Hb_006198_060 Hb_006052_040--Hb_006198_060 Hb_004122_020 Hb_004122_020 Hb_006052_040--Hb_004122_020 Hb_002475_010 Hb_002475_010 Hb_006052_040--Hb_002475_010 Hb_004712_140 Hb_004712_140 Hb_006052_040--Hb_004712_140 Hb_041290_030 Hb_041290_030 Hb_006052_040--Hb_041290_030 Hb_001677_130 Hb_001677_130 Hb_000398_200--Hb_001677_130 Hb_000117_110 Hb_000117_110 Hb_000398_200--Hb_000117_110 Hb_000398_200--Hb_004712_140 Hb_007328_010 Hb_007328_010 Hb_000398_200--Hb_007328_010 Hb_011925_010 Hb_011925_010 Hb_000398_200--Hb_011925_010 Hb_007305_040 Hb_007305_040 Hb_000625_040--Hb_007305_040 Hb_000625_040--Hb_166155_010 Hb_002890_060 Hb_002890_060 Hb_000625_040--Hb_002890_060 Hb_000123_310 Hb_000123_310 Hb_000625_040--Hb_000123_310 Hb_000625_040--Hb_004122_020 Hb_000072_160 Hb_000072_160 Hb_009786_010--Hb_000072_160 Hb_003176_020 Hb_003176_020 Hb_009786_010--Hb_003176_020 Hb_014361_130 Hb_014361_130 Hb_009786_010--Hb_014361_130 Hb_002968_010 Hb_002968_010 Hb_009786_010--Hb_002968_010 Hb_081686_030 Hb_081686_030 Hb_009786_010--Hb_081686_030 Hb_166155_010--Hb_005048_080 Hb_166155_010--Hb_009786_010 Hb_166155_010--Hb_007305_040 Hb_166155_010--Hb_000398_200 Hb_000029_180 Hb_000029_180 Hb_005048_080--Hb_000029_180 Hb_005048_080--Hb_003176_020 Hb_000286_180 Hb_000286_180 Hb_005048_080--Hb_000286_180 Hb_030370_070 Hb_030370_070 Hb_005048_080--Hb_030370_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0303943 26.7069 0.872684 5.16949 0.204802 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.18731 4.71998

CAGE analysis