Hb_000286_180

Information

Type -
Description -
Location Contig286: 161258-162608
Sequence    

Annotation

kegg
ID vvi:100241312
description dnaJ homolog subfamily B member 4
nr
ID XP_012071393.1
description PREDICTED: dnaJ homolog subfamily B member 4 [Jatropha curcas]
swissprot
ID Q80Y75
description DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1
trembl
ID W9SBK3
description DnaJ homolog subfamily B member 13 OS=Morus notabilis GN=L484_024216 PE=4 SV=1
Gene Ontology
ID GO:0051082
description dnaj homolog subfamily b member 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000286_180 0.0 - - PREDICTED: dnaJ homolog subfamily B member 4 [Jatropha curcas]
2 Hb_003176_020 0.1099913589 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]
3 Hb_005048_080 0.1451906916 - - PREDICTED: PAP-specific phosphatase HAL2-like [Jatropha curcas]
4 Hb_000392_510 0.1521424966 - - PREDICTED: mitochondrial outer membrane protein porin of 36 kDa-like [Jatropha curcas]
5 Hb_000029_180 0.153222794 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
6 Hb_003376_150 0.1548960435 - - PREDICTED: peroxidase 21 [Jatropha curcas]
7 Hb_002218_060 0.1608944657 - - conserved hypothetical protein [Ricinus communis]
8 Hb_009786_010 0.1721326381 - - Phosphoprotein phosphatase [Theobroma cacao]
9 Hb_007137_020 0.1817446582 - - multicopper oxidase, putative [Ricinus communis]
10 Hb_000119_050 0.1822546964 - - PREDICTED: transmembrane protein 45B-like [Jatropha curcas]
11 Hb_000465_380 0.1847387166 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
12 Hb_030370_070 0.1852856541 - - ATP binding protein, putative [Ricinus communis]
13 Hb_056506_010 0.1896361996 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
14 Hb_030873_010 0.1917428126 - - PREDICTED: putative cyclic nucleotide-gated ion channel 15 isoform X2 [Cucumis sativus]
15 Hb_008195_020 0.1959601631 - - Vacuolar-processing enzyme precursor [Ricinus communis]
16 Hb_081686_030 0.1966171825 - - hypothetical protein MIMGU_mgv11b016770mg [Erythranthe guttata]
17 Hb_001008_020 0.1988985189 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_001899_040 0.2004732755 - - PREDICTED: cyclic nucleotide-gated ion channel 2-like [Jatropha curcas]
19 Hb_166155_010 0.2028992011 - - PREDICTED: metalloendoproteinase 1 [Jatropha curcas]
20 Hb_002890_060 0.2054956787 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Eucalyptus grandis]

Gene co-expression network

sample Hb_000286_180 Hb_000286_180 Hb_003176_020 Hb_003176_020 Hb_000286_180--Hb_003176_020 Hb_005048_080 Hb_005048_080 Hb_000286_180--Hb_005048_080 Hb_000392_510 Hb_000392_510 Hb_000286_180--Hb_000392_510 Hb_000029_180 Hb_000029_180 Hb_000286_180--Hb_000029_180 Hb_003376_150 Hb_003376_150 Hb_000286_180--Hb_003376_150 Hb_002218_060 Hb_002218_060 Hb_000286_180--Hb_002218_060 Hb_009786_010 Hb_009786_010 Hb_003176_020--Hb_009786_010 Hb_003176_020--Hb_003376_150 Hb_003176_020--Hb_005048_080 Hb_000072_160 Hb_000072_160 Hb_003176_020--Hb_000072_160 Hb_000465_380 Hb_000465_380 Hb_003176_020--Hb_000465_380 Hb_005048_080--Hb_003376_150 Hb_166155_010 Hb_166155_010 Hb_005048_080--Hb_166155_010 Hb_005048_080--Hb_000029_180 Hb_030370_070 Hb_030370_070 Hb_005048_080--Hb_030370_070 Hb_007137_020 Hb_007137_020 Hb_000392_510--Hb_007137_020 Hb_001899_040 Hb_001899_040 Hb_000392_510--Hb_001899_040 Hb_000392_510--Hb_002218_060 Hb_009898_060 Hb_009898_060 Hb_000392_510--Hb_009898_060 Hb_000640_280 Hb_000640_280 Hb_000392_510--Hb_000640_280 Hb_000029_180--Hb_000465_380 Hb_000029_180--Hb_030370_070 Hb_000029_180--Hb_002218_060 Hb_108055_010 Hb_108055_010 Hb_000029_180--Hb_108055_010 Hb_010327_010 Hb_010327_010 Hb_000029_180--Hb_010327_010 Hb_129399_010 Hb_129399_010 Hb_000029_180--Hb_129399_010 Hb_006052_040 Hb_006052_040 Hb_003376_150--Hb_006052_040 Hb_000398_200 Hb_000398_200 Hb_003376_150--Hb_000398_200 Hb_000625_040 Hb_000625_040 Hb_003376_150--Hb_000625_040 Hb_003376_150--Hb_009786_010 Hb_003376_150--Hb_166155_010 Hb_000117_110 Hb_000117_110 Hb_002218_060--Hb_000117_110 Hb_001677_130 Hb_001677_130 Hb_002218_060--Hb_001677_130 Hb_003867_030 Hb_003867_030 Hb_002218_060--Hb_003867_030 Hb_002218_060--Hb_000398_200 Hb_002218_060--Hb_030370_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.25508 0 0.0335143 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0287056 0.0735967

CAGE analysis