Hb_005048_080

Information

Type -
Description -
Location Contig5048: 50631-54371
Sequence    

Annotation

kegg
ID pop:POPTR_0004s03660g
description POPTRDRAFT_817763; hypothetical protein
nr
ID XP_012091527.1
description PREDICTED: PAP-specific phosphatase HAL2-like [Jatropha curcas]
swissprot
ID Q38945
description PAP-specific phosphatase HAL2-like OS=Arabidopsis thaliana GN=AHL PE=2 SV=1
trembl
ID A0A067JAW2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21378 PE=4 SV=1
Gene Ontology
ID GO:0008441
description pap-specific phosphatase hal2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45972: 50515-53132 , PASA_asmbl_45974: 53457-54365
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005048_080 0.0 - - PREDICTED: PAP-specific phosphatase HAL2-like [Jatropha curcas]
2 Hb_003376_150 0.1227540889 - - PREDICTED: peroxidase 21 [Jatropha curcas]
3 Hb_166155_010 0.1371350093 - - PREDICTED: metalloendoproteinase 1 [Jatropha curcas]
4 Hb_000029_180 0.1416992159 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
5 Hb_003176_020 0.1429217413 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]
6 Hb_000286_180 0.1451906916 - - PREDICTED: dnaJ homolog subfamily B member 4 [Jatropha curcas]
7 Hb_030370_070 0.1468557795 - - ATP binding protein, putative [Ricinus communis]
8 Hb_009786_010 0.1505928965 - - Phosphoprotein phosphatase [Theobroma cacao]
9 Hb_006052_040 0.1533882809 - - pyruvate decarboxylase [Hevea brasiliensis]
10 Hb_041290_030 0.160730769 - - PREDICTED: uncharacterized protein LOC105640874 [Jatropha curcas]
11 Hb_000465_380 0.1617640759 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
12 Hb_002218_060 0.1624053473 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000333_120 0.1671051061 - - PREDICTED: thiol protease aleurain-like [Jatropha curcas]
14 Hb_008253_040 0.1727812473 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
15 Hb_000117_110 0.1734956367 - - transferase, putative [Ricinus communis]
16 Hb_000398_200 0.1753085162 - - PREDICTED: uncharacterized protein LOC105631579 [Jatropha curcas]
17 Hb_002571_010 0.1788388593 - - cationic amino acid transporter, putative [Ricinus communis]
18 Hb_006198_060 0.1793837347 - - PREDICTED: protein SULFUR DEFICIENCY-INDUCED 1 [Jatropha curcas]
19 Hb_009247_030 0.181489837 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like [Jatropha curcas]
20 Hb_008550_030 0.1835933995 - - PREDICTED: tonoplast dicarboxylate transporter [Jatropha curcas]

Gene co-expression network

sample Hb_005048_080 Hb_005048_080 Hb_003376_150 Hb_003376_150 Hb_005048_080--Hb_003376_150 Hb_166155_010 Hb_166155_010 Hb_005048_080--Hb_166155_010 Hb_000029_180 Hb_000029_180 Hb_005048_080--Hb_000029_180 Hb_003176_020 Hb_003176_020 Hb_005048_080--Hb_003176_020 Hb_000286_180 Hb_000286_180 Hb_005048_080--Hb_000286_180 Hb_030370_070 Hb_030370_070 Hb_005048_080--Hb_030370_070 Hb_006052_040 Hb_006052_040 Hb_003376_150--Hb_006052_040 Hb_000398_200 Hb_000398_200 Hb_003376_150--Hb_000398_200 Hb_000625_040 Hb_000625_040 Hb_003376_150--Hb_000625_040 Hb_009786_010 Hb_009786_010 Hb_003376_150--Hb_009786_010 Hb_003376_150--Hb_166155_010 Hb_166155_010--Hb_000625_040 Hb_166155_010--Hb_009786_010 Hb_007305_040 Hb_007305_040 Hb_166155_010--Hb_007305_040 Hb_166155_010--Hb_000398_200 Hb_000465_380 Hb_000465_380 Hb_000029_180--Hb_000465_380 Hb_000029_180--Hb_030370_070 Hb_002218_060 Hb_002218_060 Hb_000029_180--Hb_002218_060 Hb_108055_010 Hb_108055_010 Hb_000029_180--Hb_108055_010 Hb_010327_010 Hb_010327_010 Hb_000029_180--Hb_010327_010 Hb_129399_010 Hb_129399_010 Hb_000029_180--Hb_129399_010 Hb_003176_020--Hb_000286_180 Hb_003176_020--Hb_009786_010 Hb_003176_020--Hb_003376_150 Hb_000072_160 Hb_000072_160 Hb_003176_020--Hb_000072_160 Hb_003176_020--Hb_000465_380 Hb_000392_510 Hb_000392_510 Hb_000286_180--Hb_000392_510 Hb_000286_180--Hb_000029_180 Hb_000286_180--Hb_003376_150 Hb_000286_180--Hb_002218_060 Hb_001534_150 Hb_001534_150 Hb_030370_070--Hb_001534_150 Hb_030370_070--Hb_000465_380 Hb_008550_030 Hb_008550_030 Hb_030370_070--Hb_008550_030 Hb_001989_080 Hb_001989_080 Hb_030370_070--Hb_001989_080 Hb_107552_020 Hb_107552_020 Hb_030370_070--Hb_107552_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.177904 83.4887 2.37238 13.2766 0.198627 0.28813
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.934796 0.930154 0.32643 9.06185 21.4078

CAGE analysis