Hb_000625_040

Information

Type -
Description -
Location Contig625: 24793-26611
Sequence    

Annotation

kegg
ID rcu:RCOM_0573380
description Zeamatin precursor, putative
nr
ID XP_012065992.1
description PREDICTED: pathogenesis-related protein 5-like [Jatropha curcas]
swissprot
ID P28493
description Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1
trembl
ID A0A067LE89
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06554 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51634: 24700-25423
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000625_040 0.0 - - PREDICTED: pathogenesis-related protein 5-like [Jatropha curcas]
2 Hb_007305_040 0.0776995432 - - Nodulin-26, putative [Ricinus communis]
3 Hb_003376_150 0.1147950303 - - PREDICTED: peroxidase 21 [Jatropha curcas]
4 Hb_166155_010 0.1148097628 - - PREDICTED: metalloendoproteinase 1 [Jatropha curcas]
5 Hb_002890_060 0.121395373 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Eucalyptus grandis]
6 Hb_000123_310 0.127884389 - - PREDICTED: aquaporin TIP1-3 [Jatropha curcas]
7 Hb_004122_020 0.1280515479 transcription factor TF Family: ERF ERF/AP2 domain-containing transcription factor [Manihot esculenta]
8 Hb_002236_020 0.1310068184 - - PREDICTED: nephrocystin-3 [Jatropha curcas]
9 Hb_009786_010 0.1320052292 - - Phosphoprotein phosphatase [Theobroma cacao]
10 Hb_000398_200 0.1358135379 - - PREDICTED: uncharacterized protein LOC105631579 [Jatropha curcas]
11 Hb_000347_370 0.1364667843 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
12 Hb_024857_010 0.1377059836 - - glutaredoxin 2.1 [Hevea brasiliensis]
13 Hb_006052_040 0.1377982086 - - pyruvate decarboxylase [Hevea brasiliensis]
14 Hb_011925_010 0.1389655273 - - PREDICTED: putative disease resistance protein RGA1 isoform X1 [Jatropha curcas]
15 Hb_081686_030 0.1399893634 - - hypothetical protein MIMGU_mgv11b016770mg [Erythranthe guttata]
16 Hb_001529_020 0.141435383 - - ankyrin repeat-containing protein, putative [Ricinus communis]
17 Hb_000767_040 0.1431321915 - - cytochrome P450, putative [Ricinus communis]
18 Hb_001274_040 0.1432324809 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
19 Hb_002968_010 0.1445703005 - - PREDICTED: pectinesterase [Jatropha curcas]
20 Hb_004531_010 0.1447561325 - - PREDICTED: ankyrin repeat-containing protein At2g01680-like [Jatropha curcas]

Gene co-expression network

sample Hb_000625_040 Hb_000625_040 Hb_007305_040 Hb_007305_040 Hb_000625_040--Hb_007305_040 Hb_003376_150 Hb_003376_150 Hb_000625_040--Hb_003376_150 Hb_166155_010 Hb_166155_010 Hb_000625_040--Hb_166155_010 Hb_002890_060 Hb_002890_060 Hb_000625_040--Hb_002890_060 Hb_000123_310 Hb_000123_310 Hb_000625_040--Hb_000123_310 Hb_004122_020 Hb_004122_020 Hb_000625_040--Hb_004122_020 Hb_002236_020 Hb_002236_020 Hb_007305_040--Hb_002236_020 Hb_000347_370 Hb_000347_370 Hb_007305_040--Hb_000347_370 Hb_024857_010 Hb_024857_010 Hb_007305_040--Hb_024857_010 Hb_004531_010 Hb_004531_010 Hb_007305_040--Hb_004531_010 Hb_000260_130 Hb_000260_130 Hb_007305_040--Hb_000260_130 Hb_006052_040 Hb_006052_040 Hb_003376_150--Hb_006052_040 Hb_000398_200 Hb_000398_200 Hb_003376_150--Hb_000398_200 Hb_009786_010 Hb_009786_010 Hb_003376_150--Hb_009786_010 Hb_003376_150--Hb_166155_010 Hb_005048_080 Hb_005048_080 Hb_003376_150--Hb_005048_080 Hb_166155_010--Hb_005048_080 Hb_166155_010--Hb_009786_010 Hb_166155_010--Hb_007305_040 Hb_166155_010--Hb_000398_200 Hb_000111_130 Hb_000111_130 Hb_002890_060--Hb_000111_130 Hb_001274_040 Hb_001274_040 Hb_002890_060--Hb_001274_040 Hb_009778_030 Hb_009778_030 Hb_002890_060--Hb_009778_030 Hb_002890_060--Hb_000123_310 Hb_000146_110 Hb_000146_110 Hb_002890_060--Hb_000146_110 Hb_000003_620 Hb_000003_620 Hb_002890_060--Hb_000003_620 Hb_000123_310--Hb_009778_030 Hb_000123_310--Hb_000146_110 Hb_005054_300 Hb_005054_300 Hb_000123_310--Hb_005054_300 Hb_041290_030 Hb_041290_030 Hb_000123_310--Hb_041290_030 Hb_021596_070 Hb_021596_070 Hb_000123_310--Hb_021596_070 Hb_002968_010 Hb_002968_010 Hb_004122_020--Hb_002968_010 Hb_000656_370 Hb_000656_370 Hb_004122_020--Hb_000656_370 Hb_004122_020--Hb_006052_040 Hb_006198_060 Hb_006198_060 Hb_004122_020--Hb_006198_060 Hb_002475_010 Hb_002475_010 Hb_004122_020--Hb_002475_010 Hb_000000_070 Hb_000000_070 Hb_004122_020--Hb_000000_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.123647 80.8336 2.08586 17.5017 0.0591375 0.151019
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 8.53538 6.22533

CAGE analysis