Hb_041290_030

Information

Type -
Description -
Location Contig41290: 47692-48294
Sequence    

Annotation

kegg
ID rcu:RCOM_0511430
description hypothetical protein
nr
ID XP_012080666.1
description PREDICTED: uncharacterized protein LOC105640874 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K3Y5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13770 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40910: 47906-48051
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_041290_030 0.0 - - PREDICTED: uncharacterized protein LOC105640874 [Jatropha curcas]
2 Hb_004712_140 0.087365973 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
3 Hb_000123_310 0.1035657998 - - PREDICTED: aquaporin TIP1-3 [Jatropha curcas]
4 Hb_010962_030 0.1045598162 - - kinase, putative [Ricinus communis]
5 Hb_006198_060 0.1086824941 - - PREDICTED: protein SULFUR DEFICIENCY-INDUCED 1 [Jatropha curcas]
6 Hb_006052_040 0.1179396451 - - pyruvate decarboxylase [Hevea brasiliensis]
7 Hb_000146_110 0.120343504 - - resveratrol/hydroxycinnamic acid O-glucosyltransferase [Vitis labrusca]
8 Hb_021596_070 0.1210953943 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
9 Hb_000331_710 0.1313784075 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
10 Hb_002284_020 0.1332934016 - - PREDICTED: probable inorganic phosphate transporter 1-9 [Jatropha curcas]
11 Hb_000398_200 0.1336598715 - - PREDICTED: uncharacterized protein LOC105631579 [Jatropha curcas]
12 Hb_002890_060 0.1355923395 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Eucalyptus grandis]
13 Hb_000039_100 0.1369349711 - - PREDICTED: uncharacterized protein LOC105649440 [Jatropha curcas]
14 Hb_007371_020 0.1387855225 - - PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X1 [Jatropha curcas]
15 Hb_011925_010 0.139830991 - - PREDICTED: putative disease resistance protein RGA1 isoform X1 [Jatropha curcas]
16 Hb_008667_020 0.1418936406 - - PREDICTED: uncharacterized protein LOC101299609 [Fragaria vesca subsp. vesca]
17 Hb_010327_010 0.1428340519 - - calcium ion binding protein, putative [Ricinus communis]
18 Hb_000307_110 0.143853636 - - hypothetical protein JCGZ_08160 [Jatropha curcas]
19 Hb_004122_020 0.1441865428 transcription factor TF Family: ERF ERF/AP2 domain-containing transcription factor [Manihot esculenta]
20 Hb_009778_030 0.1447428033 transcription factor TF Family: TCP PREDICTED: transcription factor TCP23-like [Populus euphratica]

Gene co-expression network

sample Hb_041290_030 Hb_041290_030 Hb_004712_140 Hb_004712_140 Hb_041290_030--Hb_004712_140 Hb_000123_310 Hb_000123_310 Hb_041290_030--Hb_000123_310 Hb_010962_030 Hb_010962_030 Hb_041290_030--Hb_010962_030 Hb_006198_060 Hb_006198_060 Hb_041290_030--Hb_006198_060 Hb_006052_040 Hb_006052_040 Hb_041290_030--Hb_006052_040 Hb_000146_110 Hb_000146_110 Hb_041290_030--Hb_000146_110 Hb_010327_010 Hb_010327_010 Hb_004712_140--Hb_010327_010 Hb_000331_710 Hb_000331_710 Hb_004712_140--Hb_000331_710 Hb_021596_070 Hb_021596_070 Hb_004712_140--Hb_021596_070 Hb_000398_200 Hb_000398_200 Hb_004712_140--Hb_000398_200 Hb_001677_130 Hb_001677_130 Hb_004712_140--Hb_001677_130 Hb_009778_030 Hb_009778_030 Hb_000123_310--Hb_009778_030 Hb_002890_060 Hb_002890_060 Hb_000123_310--Hb_002890_060 Hb_000123_310--Hb_000146_110 Hb_005054_300 Hb_005054_300 Hb_000123_310--Hb_005054_300 Hb_000123_310--Hb_021596_070 Hb_007371_020 Hb_007371_020 Hb_010962_030--Hb_007371_020 Hb_010962_030--Hb_021596_070 Hb_010962_030--Hb_000146_110 Hb_000003_620 Hb_000003_620 Hb_010962_030--Hb_000003_620 Hb_010962_030--Hb_009778_030 Hb_006198_060--Hb_006052_040 Hb_004122_020 Hb_004122_020 Hb_006198_060--Hb_004122_020 Hb_006198_060--Hb_000123_310 Hb_000338_030 Hb_000338_030 Hb_006198_060--Hb_000338_030 Hb_000579_220 Hb_000579_220 Hb_006198_060--Hb_000579_220 Hb_006052_040--Hb_004122_020 Hb_002475_010 Hb_002475_010 Hb_006052_040--Hb_002475_010 Hb_003376_150 Hb_003376_150 Hb_006052_040--Hb_003376_150 Hb_006052_040--Hb_004712_140 Hb_000146_110--Hb_000003_620 Hb_000146_110--Hb_009778_030 Hb_000146_110--Hb_002890_060 Hb_000111_130 Hb_000111_130 Hb_000146_110--Hb_000111_130 Hb_000146_110--Hb_007371_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 42.954 4.05084 5.90425 0 0.0769358
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.60138 0.157546 0.137873 5.78078 4.72953

CAGE analysis