Hb_000465_380

Information

Type -
Description -
Location Contig465: 363205-363951
Sequence    

Annotation

kegg
ID rcu:RCOM_0191610
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.26)
nr
ID XP_002532358.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID Q39202
description G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2
trembl
ID B9T289
description Serine/threonine-protein kinase OS=Ricinus communis GN=RCOM_0191610 PE=3 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase rlk1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000465_380 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_000029_180 0.077006035 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
3 Hb_108055_010 0.0844859477 - - UDP-glucosyltransferase, putative [Ricinus communis]
4 Hb_010921_060 0.0943185155 - - ATP binding protein, putative [Ricinus communis]
5 Hb_030370_070 0.0955731752 - - ATP binding protein, putative [Ricinus communis]
6 Hb_129399_010 0.1026260848 - - cytochrome P450, putative [Ricinus communis]
7 Hb_002239_020 0.1069713462 - - MLO, putative [Theobroma cacao]
8 Hb_011344_140 0.1074983936 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]
9 Hb_000146_110 0.126449181 - - resveratrol/hydroxycinnamic acid O-glucosyltransferase [Vitis labrusca]
10 Hb_002045_220 0.1301089572 - - PREDICTED: uncharacterized protein LOC105649919 isoform X1 [Jatropha curcas]
11 Hb_000333_120 0.1340791096 - - PREDICTED: thiol protease aleurain-like [Jatropha curcas]
12 Hb_001907_020 0.1341982715 - - PREDICTED: receptor-like protein 12 [Vitis vinifera]
13 Hb_000044_050 0.1355093941 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
14 Hb_001534_150 0.1395240927 - - PREDICTED: uncharacterized permease C29B12.14c [Jatropha curcas]
15 Hb_010327_010 0.1413717795 - - calcium ion binding protein, putative [Ricinus communis]
16 Hb_006052_040 0.143546595 - - pyruvate decarboxylase [Hevea brasiliensis]
17 Hb_009247_030 0.1439791053 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like [Jatropha curcas]
18 Hb_000668_160 0.1447418531 - - PREDICTED: sulfate transporter 1.3-like [Jatropha curcas]
19 Hb_004712_140 0.1474043747 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
20 Hb_010620_020 0.1488501136 - - receptor protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000465_380 Hb_000465_380 Hb_000029_180 Hb_000029_180 Hb_000465_380--Hb_000029_180 Hb_108055_010 Hb_108055_010 Hb_000465_380--Hb_108055_010 Hb_010921_060 Hb_010921_060 Hb_000465_380--Hb_010921_060 Hb_030370_070 Hb_030370_070 Hb_000465_380--Hb_030370_070 Hb_129399_010 Hb_129399_010 Hb_000465_380--Hb_129399_010 Hb_002239_020 Hb_002239_020 Hb_000465_380--Hb_002239_020 Hb_000029_180--Hb_030370_070 Hb_002218_060 Hb_002218_060 Hb_000029_180--Hb_002218_060 Hb_000029_180--Hb_108055_010 Hb_010327_010 Hb_010327_010 Hb_000029_180--Hb_010327_010 Hb_000029_180--Hb_129399_010 Hb_108055_010--Hb_129399_010 Hb_108055_010--Hb_010327_010 Hb_108055_010--Hb_010921_060 Hb_000333_120 Hb_000333_120 Hb_108055_010--Hb_000333_120 Hb_010921_060--Hb_002239_020 Hb_000819_010 Hb_000819_010 Hb_010921_060--Hb_000819_010 Hb_000668_160 Hb_000668_160 Hb_010921_060--Hb_000668_160 Hb_011344_140 Hb_011344_140 Hb_010921_060--Hb_011344_140 Hb_000521_290 Hb_000521_290 Hb_010921_060--Hb_000521_290 Hb_001534_150 Hb_001534_150 Hb_030370_070--Hb_001534_150 Hb_008550_030 Hb_008550_030 Hb_030370_070--Hb_008550_030 Hb_001989_080 Hb_001989_080 Hb_030370_070--Hb_001989_080 Hb_107552_020 Hb_107552_020 Hb_030370_070--Hb_107552_020 Hb_010620_020 Hb_010620_020 Hb_129399_010--Hb_010620_020 Hb_000146_110 Hb_000146_110 Hb_129399_010--Hb_000146_110 Hb_000003_620 Hb_000003_620 Hb_129399_010--Hb_000003_620 Hb_129399_010--Hb_010921_060 Hb_009247_030 Hb_009247_030 Hb_002239_020--Hb_009247_030 Hb_002097_210 Hb_002097_210 Hb_002239_020--Hb_002097_210 Hb_007237_090 Hb_007237_090 Hb_002239_020--Hb_007237_090 Hb_008040_060 Hb_008040_060 Hb_002239_020--Hb_008040_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.806287 0.075596 0.0920783 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.165239 0.231867

CAGE analysis