Hb_010921_060

Information

Type -
Description -
Location Contig10921: 55286-57670
Sequence    

Annotation

kegg
ID rcu:RCOM_1148780
description ATP binding protein, putative (EC:2.7.10.1)
nr
ID XP_002527534.1
description ATP binding protein, putative [Ricinus communis]
swissprot
ID Q9FLV4
description G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1
trembl
ID B9SNG5
description Serine/threonine-protein kinase OS=Ricinus communis GN=RCOM_1148780 PE=3 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase at1g34300

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010921_060 0.0 - - ATP binding protein, putative [Ricinus communis]
2 Hb_002239_020 0.0863531442 - - MLO, putative [Theobroma cacao]
3 Hb_000819_010 0.0922857343 - - Receptor-like protein kinase 1, putative [Theobroma cacao]
4 Hb_000465_380 0.0943185155 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
5 Hb_000668_160 0.0986860394 - - PREDICTED: sulfate transporter 1.3-like [Jatropha curcas]
6 Hb_011344_140 0.1038604094 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]
7 Hb_000521_290 0.1050204118 - - hypothetical protein POPTR_0001s23530g [Populus trichocarpa]
8 Hb_108055_010 0.109084616 - - UDP-glucosyltransferase, putative [Ricinus communis]
9 Hb_002045_220 0.1137731815 - - PREDICTED: uncharacterized protein LOC105649919 isoform X1 [Jatropha curcas]
10 Hb_000705_130 0.1142439055 - - conserved hypothetical protein [Ricinus communis]
11 Hb_129399_010 0.1182769083 - - cytochrome P450, putative [Ricinus communis]
12 Hb_000002_100 0.1215261926 - - phosphate transporter [Manihot esculenta]
13 Hb_009803_030 0.1225244611 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
14 Hb_000412_090 0.1241015854 - - receptor serine/threonine kinase, putative [Ricinus communis]
15 Hb_008040_060 0.127353464 - - PREDICTED: potassium transporter 8 [Jatropha curcas]
16 Hb_003914_050 0.1292526244 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
17 Hb_001534_150 0.1301178828 - - PREDICTED: uncharacterized permease C29B12.14c [Jatropha curcas]
18 Hb_009247_030 0.1347435893 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like [Jatropha curcas]
19 Hb_000331_710 0.1355506109 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
20 Hb_001515_030 0.1356459474 - - UDP-glucosyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_010921_060 Hb_010921_060 Hb_002239_020 Hb_002239_020 Hb_010921_060--Hb_002239_020 Hb_000819_010 Hb_000819_010 Hb_010921_060--Hb_000819_010 Hb_000465_380 Hb_000465_380 Hb_010921_060--Hb_000465_380 Hb_000668_160 Hb_000668_160 Hb_010921_060--Hb_000668_160 Hb_011344_140 Hb_011344_140 Hb_010921_060--Hb_011344_140 Hb_000521_290 Hb_000521_290 Hb_010921_060--Hb_000521_290 Hb_009247_030 Hb_009247_030 Hb_002239_020--Hb_009247_030 Hb_002097_210 Hb_002097_210 Hb_002239_020--Hb_002097_210 Hb_007237_090 Hb_007237_090 Hb_002239_020--Hb_007237_090 Hb_002239_020--Hb_000465_380 Hb_008040_060 Hb_008040_060 Hb_002239_020--Hb_008040_060 Hb_000819_010--Hb_000668_160 Hb_009803_030 Hb_009803_030 Hb_000819_010--Hb_009803_030 Hb_000280_110 Hb_000280_110 Hb_000819_010--Hb_000280_110 Hb_000819_010--Hb_008040_060 Hb_000522_130 Hb_000522_130 Hb_000819_010--Hb_000522_130 Hb_000029_180 Hb_000029_180 Hb_000465_380--Hb_000029_180 Hb_108055_010 Hb_108055_010 Hb_000465_380--Hb_108055_010 Hb_030370_070 Hb_030370_070 Hb_000465_380--Hb_030370_070 Hb_129399_010 Hb_129399_010 Hb_000465_380--Hb_129399_010 Hb_000668_160--Hb_000280_110 Hb_000668_160--Hb_009803_030 Hb_002600_010 Hb_002600_010 Hb_000668_160--Hb_002600_010 Hb_107543_010 Hb_107543_010 Hb_000668_160--Hb_107543_010 Hb_002045_220 Hb_002045_220 Hb_011344_140--Hb_002045_220 Hb_001907_020 Hb_001907_020 Hb_011344_140--Hb_001907_020 Hb_011344_140--Hb_000465_380 Hb_000412_090 Hb_000412_090 Hb_011344_140--Hb_000412_090 Hb_000649_280 Hb_000649_280 Hb_011344_140--Hb_000649_280 Hb_002085_070 Hb_002085_070 Hb_000521_290--Hb_002085_070 Hb_000002_100 Hb_000002_100 Hb_000521_290--Hb_000002_100 Hb_020648_020 Hb_020648_020 Hb_000521_290--Hb_020648_020 Hb_000338_030 Hb_000338_030 Hb_000521_290--Hb_000338_030 Hb_001514_100 Hb_001514_100 Hb_000521_290--Hb_001514_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00819186 42.1347 7.07245 6.63063 0 0.030944
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0185971 0.175603 0.0278691 11.5041 10.3467

CAGE analysis