Hb_000333_120

Information

Type -
Description -
Location Contig333: 94868-98922
Sequence    

Annotation

kegg
ID pop:POPTR_0006s14400g
description early leaf senescence abundant cysteine protease family protein
nr
ID XP_012077053.1
description PREDICTED: thiol protease aleurain-like [Jatropha curcas]
swissprot
ID Q8RWQ9
description Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1
trembl
ID A0A067KCP8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07488 PE=3 SV=1
Gene Ontology
ID GO:0008234
description thiol protease aleurain-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34937: 94923-98725
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000333_120 0.0 - - PREDICTED: thiol protease aleurain-like [Jatropha curcas]
2 Hb_108055_010 0.1255205188 - - UDP-glucosyltransferase, putative [Ricinus communis]
3 Hb_000705_130 0.1333047051 - - conserved hypothetical protein [Ricinus communis]
4 Hb_015882_020 0.1338815816 desease resistance Gene Name: NB-ARC leucine-rich repeat containing protein, putative [Ricinus communis]
5 Hb_000465_380 0.1340791096 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
6 Hb_010962_030 0.1346416898 - - kinase, putative [Ricinus communis]
7 Hb_010921_060 0.1383747591 - - ATP binding protein, putative [Ricinus communis]
8 Hb_002045_220 0.1405977386 - - PREDICTED: uncharacterized protein LOC105649919 isoform X1 [Jatropha curcas]
9 Hb_006052_040 0.1424864258 - - pyruvate decarboxylase [Hevea brasiliensis]
10 Hb_004030_070 0.1430563669 - - PREDICTED: uncharacterized protein LOC105632434 [Jatropha curcas]
11 Hb_008253_040 0.1432069363 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
12 Hb_000668_160 0.1452169106 - - PREDICTED: sulfate transporter 1.3-like [Jatropha curcas]
13 Hb_001921_010 0.1452538605 - - ATP-dependent RNA helicase, putative [Ricinus communis]
14 Hb_129399_010 0.1473192176 - - cytochrome P450, putative [Ricinus communis]
15 Hb_001227_040 0.1490830778 - - PREDICTED: uncharacterized protein LOC104107451 [Nicotiana tomentosiformis]
16 Hb_002783_300 0.1503162131 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
17 Hb_000819_010 0.1519772248 - - Receptor-like protein kinase 1, putative [Theobroma cacao]
18 Hb_000029_180 0.1540078822 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
19 Hb_007371_020 0.156544024 - - PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X1 [Jatropha curcas]
20 Hb_001534_150 0.1581518159 - - PREDICTED: uncharacterized permease C29B12.14c [Jatropha curcas]

Gene co-expression network

sample Hb_000333_120 Hb_000333_120 Hb_108055_010 Hb_108055_010 Hb_000333_120--Hb_108055_010 Hb_000705_130 Hb_000705_130 Hb_000333_120--Hb_000705_130 Hb_015882_020 Hb_015882_020 Hb_000333_120--Hb_015882_020 Hb_000465_380 Hb_000465_380 Hb_000333_120--Hb_000465_380 Hb_010962_030 Hb_010962_030 Hb_000333_120--Hb_010962_030 Hb_010921_060 Hb_010921_060 Hb_000333_120--Hb_010921_060 Hb_129399_010 Hb_129399_010 Hb_108055_010--Hb_129399_010 Hb_108055_010--Hb_000465_380 Hb_010327_010 Hb_010327_010 Hb_108055_010--Hb_010327_010 Hb_108055_010--Hb_010921_060 Hb_000029_180 Hb_000029_180 Hb_108055_010--Hb_000029_180 Hb_000705_130--Hb_015882_020 Hb_000027_060 Hb_000027_060 Hb_000705_130--Hb_000027_060 Hb_000331_710 Hb_000331_710 Hb_000705_130--Hb_000331_710 Hb_008040_060 Hb_008040_060 Hb_000705_130--Hb_008040_060 Hb_001534_150 Hb_001534_150 Hb_000705_130--Hb_001534_150 Hb_000522_130 Hb_000522_130 Hb_000705_130--Hb_000522_130 Hb_033312_090 Hb_033312_090 Hb_015882_020--Hb_033312_090 Hb_015882_020--Hb_000522_130 Hb_015882_020--Hb_000027_060 Hb_015882_020--Hb_001534_150 Hb_004030_070 Hb_004030_070 Hb_015882_020--Hb_004030_070 Hb_000465_380--Hb_000029_180 Hb_000465_380--Hb_010921_060 Hb_030370_070 Hb_030370_070 Hb_000465_380--Hb_030370_070 Hb_000465_380--Hb_129399_010 Hb_002239_020 Hb_002239_020 Hb_000465_380--Hb_002239_020 Hb_007371_020 Hb_007371_020 Hb_010962_030--Hb_007371_020 Hb_021596_070 Hb_021596_070 Hb_010962_030--Hb_021596_070 Hb_000146_110 Hb_000146_110 Hb_010962_030--Hb_000146_110 Hb_041290_030 Hb_041290_030 Hb_010962_030--Hb_041290_030 Hb_000003_620 Hb_000003_620 Hb_010962_030--Hb_000003_620 Hb_009778_030 Hb_009778_030 Hb_010962_030--Hb_009778_030 Hb_010921_060--Hb_002239_020 Hb_000819_010 Hb_000819_010 Hb_010921_060--Hb_000819_010 Hb_000668_160 Hb_000668_160 Hb_010921_060--Hb_000668_160 Hb_011344_140 Hb_011344_140 Hb_010921_060--Hb_011344_140 Hb_000521_290 Hb_000521_290 Hb_010921_060--Hb_000521_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.995 1328.4 158.215 125.119 21.6543 12.5855
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.9498 2.9838 5.96041 252.663 328.546

CAGE analysis