Hb_014361_130

Information

Type -
Description -
Location Contig14361: 107858-108634
Sequence    

Annotation

kegg
ID rcu:RCOM_0396190
description hypothetical protein
nr
ID XP_012079374.1
description PREDICTED: uncharacterized protein LOC105639824 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KAK8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12514 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014361_130 0.0 - - PREDICTED: uncharacterized protein LOC105639824 [Jatropha curcas]
2 Hb_000072_160 0.0893525209 - - proline oxidase [Manihot esculenta]
3 Hb_002329_030 0.0968624925 - - PREDICTED: pleiotropic drug resistance protein 2-like isoform X1 [Jatropha curcas]
4 Hb_002272_070 0.1013241042 - - PREDICTED: keratin, type I cytoskeletal 9 [Jatropha curcas]
5 Hb_145139_010 0.1016186946 - - PREDICTED: sugar transporter ERD6-like 5 isoform X1 [Vitis vinifera]
6 Hb_009247_030 0.1048269412 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like [Jatropha curcas]
7 Hb_066320_010 0.1153944438 - - hypothetical protein VITISV_027639 [Vitis vinifera]
8 Hb_009786_010 0.1169354387 - - Phosphoprotein phosphatase [Theobroma cacao]
9 Hb_002968_010 0.1200535169 - - PREDICTED: pectinesterase [Jatropha curcas]
10 Hb_006615_190 0.1254430342 - - UDP-glycosyltransferase 1 [Linum usitatissimum]
11 Hb_000007_210 0.1265229995 - - hypothetical protein POPTR_0010s14360g [Populus trichocarpa]
12 Hb_011470_010 0.1305347779 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
13 Hb_007237_090 0.1332645616 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002097_210 0.1332740519 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000976_340 0.1358814815 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
16 Hb_002239_020 0.1389036657 - - MLO, putative [Theobroma cacao]
17 Hb_002571_010 0.1404632275 - - cationic amino acid transporter, putative [Ricinus communis]
18 Hb_084127_010 0.1405835934 - - UDP-glucosyltransferase, putative [Ricinus communis]
19 Hb_043939_010 0.1407683765 - - hypothetical protein B456_N011100 [Gossypium raimondii]
20 Hb_003371_260 0.141066107 - - hypothetical protein EUGRSUZ_B03661 [Eucalyptus grandis]

Gene co-expression network

sample Hb_014361_130 Hb_014361_130 Hb_000072_160 Hb_000072_160 Hb_014361_130--Hb_000072_160 Hb_002329_030 Hb_002329_030 Hb_014361_130--Hb_002329_030 Hb_002272_070 Hb_002272_070 Hb_014361_130--Hb_002272_070 Hb_145139_010 Hb_145139_010 Hb_014361_130--Hb_145139_010 Hb_009247_030 Hb_009247_030 Hb_014361_130--Hb_009247_030 Hb_066320_010 Hb_066320_010 Hb_014361_130--Hb_066320_010 Hb_000072_160--Hb_002272_070 Hb_000072_160--Hb_002329_030 Hb_006615_190 Hb_006615_190 Hb_000072_160--Hb_006615_190 Hb_000072_160--Hb_145139_010 Hb_002968_010 Hb_002968_010 Hb_000072_160--Hb_002968_010 Hb_002329_030--Hb_002272_070 Hb_000007_210 Hb_000007_210 Hb_002329_030--Hb_000007_210 Hb_002329_030--Hb_006615_190 Hb_084127_010 Hb_084127_010 Hb_002329_030--Hb_084127_010 Hb_011470_010 Hb_011470_010 Hb_002272_070--Hb_011470_010 Hb_126466_010 Hb_126466_010 Hb_002272_070--Hb_126466_010 Hb_002272_070--Hb_006615_190 Hb_002272_070--Hb_145139_010 Hb_145139_010--Hb_002968_010 Hb_000656_370 Hb_000656_370 Hb_145139_010--Hb_000656_370 Hb_002097_210 Hb_002097_210 Hb_145139_010--Hb_002097_210 Hb_002475_010 Hb_002475_010 Hb_145139_010--Hb_002475_010 Hb_002239_020 Hb_002239_020 Hb_009247_030--Hb_002239_020 Hb_009247_030--Hb_002097_210 Hb_002571_010 Hb_002571_010 Hb_009247_030--Hb_002571_010 Hb_009247_030--Hb_000072_160 Hb_000819_010 Hb_000819_010 Hb_009247_030--Hb_000819_010 Hb_003371_260 Hb_003371_260 Hb_066320_010--Hb_003371_260 Hb_003371_210 Hb_003371_210 Hb_066320_010--Hb_003371_210 Hb_169620_010 Hb_169620_010 Hb_066320_010--Hb_169620_010 Hb_000101_140 Hb_000101_140 Hb_066320_010--Hb_000101_140 Hb_017604_020 Hb_017604_020 Hb_066320_010--Hb_017604_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.992457 0.082799 0.450293 0 0.0323576
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.269837 0.261028

CAGE analysis