Hb_004162_030

Information

Type -
Description -
Location Contig4162: 6960-9937
Sequence    

Annotation

kegg
ID rcu:RCOM_0476320
description Lysosomal Pro-X carboxypeptidase, putative (EC:3.4.16.2)
nr
ID XP_012064654.1
description PREDICTED: lysosomal Pro-X carboxypeptidase-like [Jatropha curcas]
swissprot
ID Q9UHL4
description Dipeptidyl peptidase 2 OS=Homo sapiens GN=DPP7 PE=1 SV=3
trembl
ID B9SCN5
description Lysosomal Pro-X carboxypeptidase, putative OS=Ricinus communis GN=RCOM_0476320 PE=4 SV=1
Gene Ontology
ID GO:0004180
description lysosomal pro-x carboxypeptidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004162_030 0.0 - - PREDICTED: lysosomal Pro-X carboxypeptidase-like [Jatropha curcas]
2 Hb_004108_200 0.1043955361 - - PREDICTED: adenylate isopentenyltransferase 3, chloroplastic [Jatropha curcas]
3 Hb_083862_010 0.1347907334 - - hypothetical protein JCGZ_17956 [Jatropha curcas]
4 Hb_001031_020 0.1357488377 - - hypothetical protein VITISV_000631 [Vitis vinifera]
5 Hb_161045_010 0.1419663425 - - hypothetical protein JCGZ_15100 [Jatropha curcas]
6 Hb_002422_030 0.1485043793 - - E3 ubiquitin-protein ligase UPL5 -like protein [Gossypium arboreum]
7 Hb_011805_060 0.1497535747 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
8 Hb_001814_100 0.1510973872 - - PREDICTED: uncharacterized protein LOC105119066 [Populus euphratica]
9 Hb_009252_140 0.1511522352 - - Spotted leaf protein, putative [Ricinus communis]
10 Hb_002639_090 0.153081444 - - hypothetical protein JCGZ_08134 [Jatropha curcas]
11 Hb_000840_230 0.153450597 - - RING-H2 finger protein ATL1L, putative [Ricinus communis]
12 Hb_008931_020 0.1537531292 - - Receptor like protein 46, putative [Theobroma cacao]
13 Hb_000045_110 0.1589858343 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
14 Hb_011671_290 0.1604319296 transcription factor TF Family: ERF hypothetical protein JCGZ_26299 [Jatropha curcas]
15 Hb_000635_170 0.160873865 - - cytochrome P450, putative [Ricinus communis]
16 Hb_000563_380 0.1719939017 - - hypothetical protein CICLE_v10007206mg [Citrus clementina]
17 Hb_002572_060 0.1725930881 - - conserved hypothetical protein [Ricinus communis]
18 Hb_052530_030 0.1774097129 - - PREDICTED: cytochrome P450 78A9 [Jatropha curcas]
19 Hb_000414_100 0.1808046069 - - PREDICTED: uncharacterized protein LOC105643784 [Jatropha curcas]
20 Hb_000072_310 0.182133024 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 43-like [Jatropha curcas]

Gene co-expression network

sample Hb_004162_030 Hb_004162_030 Hb_004108_200 Hb_004108_200 Hb_004162_030--Hb_004108_200 Hb_083862_010 Hb_083862_010 Hb_004162_030--Hb_083862_010 Hb_001031_020 Hb_001031_020 Hb_004162_030--Hb_001031_020 Hb_161045_010 Hb_161045_010 Hb_004162_030--Hb_161045_010 Hb_002422_030 Hb_002422_030 Hb_004162_030--Hb_002422_030 Hb_011805_060 Hb_011805_060 Hb_004162_030--Hb_011805_060 Hb_004108_200--Hb_001031_020 Hb_000635_170 Hb_000635_170 Hb_004108_200--Hb_000635_170 Hb_000045_110 Hb_000045_110 Hb_004108_200--Hb_000045_110 Hb_008931_020 Hb_008931_020 Hb_004108_200--Hb_008931_020 Hb_006717_020 Hb_006717_020 Hb_004108_200--Hb_006717_020 Hb_107495_050 Hb_107495_050 Hb_083862_010--Hb_107495_050 Hb_083862_010--Hb_002422_030 Hb_012423_020 Hb_012423_020 Hb_083862_010--Hb_012423_020 Hb_002639_090 Hb_002639_090 Hb_083862_010--Hb_002639_090 Hb_000072_310 Hb_000072_310 Hb_083862_010--Hb_000072_310 Hb_000563_380 Hb_000563_380 Hb_001031_020--Hb_000563_380 Hb_028487_080 Hb_028487_080 Hb_001031_020--Hb_028487_080 Hb_001031_020--Hb_008931_020 Hb_001031_020--Hb_000635_170 Hb_001814_100 Hb_001814_100 Hb_161045_010--Hb_001814_100 Hb_000260_130 Hb_000260_130 Hb_161045_010--Hb_000260_130 Hb_073973_180 Hb_073973_180 Hb_161045_010--Hb_073973_180 Hb_004242_160 Hb_004242_160 Hb_161045_010--Hb_004242_160 Hb_161045_010--Hb_002422_030 Hb_001098_020 Hb_001098_020 Hb_161045_010--Hb_001098_020 Hb_002422_030--Hb_001814_100 Hb_000840_230 Hb_000840_230 Hb_002422_030--Hb_000840_230 Hb_002820_090 Hb_002820_090 Hb_002422_030--Hb_002820_090 Hb_002475_110 Hb_002475_110 Hb_011805_060--Hb_002475_110 Hb_000610_030 Hb_000610_030 Hb_011805_060--Hb_000610_030 Hb_013726_100 Hb_013726_100 Hb_011805_060--Hb_013726_100 Hb_002311_490 Hb_002311_490 Hb_011805_060--Hb_002311_490 Hb_011671_290 Hb_011671_290 Hb_011805_060--Hb_011671_290 Hb_011805_060--Hb_002639_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.85545 0.0514996 0.629923 0.0376533 0.025134
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.25142

CAGE analysis