Hb_083862_010

Information

Type -
Description -
Location Contig83862: 50-367
Sequence    

Annotation

kegg
ID pop:POPTR_0001s13990g
description POPTRDRAFT_63116; hypothetical protein
nr
ID KDP26798.1
description hypothetical protein JCGZ_17956 [Jatropha curcas]
swissprot
ID Q9LMX7
description Cytochrome P450 78A5 OS=Arabidopsis thaliana GN=CYP78A5 PE=2 SV=1
trembl
ID A0A067JVI0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17956 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 78a5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60026: 1-216
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_083862_010 0.0 - - hypothetical protein JCGZ_17956 [Jatropha curcas]
2 Hb_107495_050 0.131175842 transcription factor TF Family: MIKC mads box protein, putative [Ricinus communis]
3 Hb_004162_030 0.1347907334 - - PREDICTED: lysosomal Pro-X carboxypeptidase-like [Jatropha curcas]
4 Hb_002422_030 0.1517072734 - - E3 ubiquitin-protein ligase UPL5 -like protein [Gossypium arboreum]
5 Hb_012423_020 0.1570549696 - - hypothetical protein JCGZ_20730 [Jatropha curcas]
6 Hb_002639_090 0.1674910665 - - hypothetical protein JCGZ_08134 [Jatropha curcas]
7 Hb_000072_310 0.1696140593 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 43-like [Jatropha curcas]
8 Hb_005588_140 0.1710835964 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000840_230 0.1763197705 - - RING-H2 finger protein ATL1L, putative [Ricinus communis]
10 Hb_000087_180 0.176400522 - - conserved hypothetical protein [Ricinus communis]
11 Hb_161045_010 0.1807336019 - - hypothetical protein JCGZ_15100 [Jatropha curcas]
12 Hb_000506_140 0.1817545066 - - hypothetical protein PRUPE_ppb019425mg [Prunus persica]
13 Hb_000796_200 0.1826079681 - - PREDICTED: probable glycerol-3-phosphate acyltransferase 3 [Jatropha curcas]
14 Hb_011805_060 0.1849687935 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
15 Hb_000563_460 0.1882490003 - - PREDICTED: RING-H2 finger protein ATL2 [Jatropha curcas]
16 Hb_073973_180 0.1927537246 - - PREDICTED: WAT1-related protein At4g08290 isoform X1 [Populus euphratica]
17 Hb_000029_280 0.1954992885 - - PREDICTED: uncharacterized protein LOC105631804 [Jatropha curcas]
18 Hb_002311_490 0.1968880076 - - PREDICTED: RING-H2 finger protein ATL2 [Jatropha curcas]
19 Hb_052530_030 0.1997814473 - - PREDICTED: cytochrome P450 78A9 [Jatropha curcas]
20 Hb_004108_200 0.2010905601 - - PREDICTED: adenylate isopentenyltransferase 3, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_083862_010 Hb_083862_010 Hb_107495_050 Hb_107495_050 Hb_083862_010--Hb_107495_050 Hb_004162_030 Hb_004162_030 Hb_083862_010--Hb_004162_030 Hb_002422_030 Hb_002422_030 Hb_083862_010--Hb_002422_030 Hb_012423_020 Hb_012423_020 Hb_083862_010--Hb_012423_020 Hb_002639_090 Hb_002639_090 Hb_083862_010--Hb_002639_090 Hb_000072_310 Hb_000072_310 Hb_083862_010--Hb_000072_310 Hb_005588_140 Hb_005588_140 Hb_107495_050--Hb_005588_140 Hb_107495_050--Hb_000072_310 Hb_000087_180 Hb_000087_180 Hb_107495_050--Hb_000087_180 Hb_107495_050--Hb_002639_090 Hb_000506_140 Hb_000506_140 Hb_107495_050--Hb_000506_140 Hb_004108_200 Hb_004108_200 Hb_004162_030--Hb_004108_200 Hb_001031_020 Hb_001031_020 Hb_004162_030--Hb_001031_020 Hb_161045_010 Hb_161045_010 Hb_004162_030--Hb_161045_010 Hb_004162_030--Hb_002422_030 Hb_011805_060 Hb_011805_060 Hb_004162_030--Hb_011805_060 Hb_002422_030--Hb_161045_010 Hb_001814_100 Hb_001814_100 Hb_002422_030--Hb_001814_100 Hb_000840_230 Hb_000840_230 Hb_002422_030--Hb_000840_230 Hb_002820_090 Hb_002820_090 Hb_002422_030--Hb_002820_090 Hb_000796_200 Hb_000796_200 Hb_012423_020--Hb_000796_200 Hb_009247_020 Hb_009247_020 Hb_012423_020--Hb_009247_020 Hb_136027_010 Hb_136027_010 Hb_012423_020--Hb_136027_010 Hb_012423_020--Hb_000506_140 Hb_016404_010 Hb_016404_010 Hb_012423_020--Hb_016404_010 Hb_000563_460 Hb_000563_460 Hb_012423_020--Hb_000563_460 Hb_002639_090--Hb_000840_230 Hb_002639_090--Hb_000072_310 Hb_077562_010 Hb_077562_010 Hb_002639_090--Hb_077562_010 Hb_052530_030 Hb_052530_030 Hb_002639_090--Hb_052530_030 Hb_009393_010 Hb_009393_010 Hb_002639_090--Hb_009393_010 Hb_002639_090--Hb_011805_060 Hb_000072_310--Hb_005588_140 Hb_000072_310--Hb_052530_030 Hb_000072_310--Hb_000840_230 Hb_000318_320 Hb_000318_320 Hb_000072_310--Hb_000318_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 8.4794 0.356093 1.90044 0.416719 0.255406
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.407238

CAGE analysis