Hb_000119_050

Information

Type -
Description -
Location Contig119: 54095-55063
Sequence    

Annotation

kegg
ID rcu:RCOM_1455230
description hypothetical protein
nr
ID XP_012093326.1
description PREDICTED: transmembrane protein 45B-like [Jatropha curcas]
swissprot
ID Q3T130
description Transmembrane protein 45B OS=Bos taurus GN=TMEM45B PE=2 SV=1
trembl
ID A0A067LIB7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19207 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000119_050 0.0 - - PREDICTED: transmembrane protein 45B-like [Jatropha curcas]
2 Hb_001850_010 0.1102799997 - - PREDICTED: cytochrome P450 71B34-like [Jatropha curcas]
3 Hb_001274_040 0.1103424805 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
4 Hb_000767_040 0.1209320174 - - cytochrome P450, putative [Ricinus communis]
5 Hb_030873_010 0.1230126837 - - PREDICTED: putative cyclic nucleotide-gated ion channel 15 isoform X2 [Cucumis sativus]
6 Hb_000111_130 0.1285182278 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
7 Hb_005081_060 0.1290184471 - - hypothetical protein EUGRSUZ_C00833 [Eucalyptus grandis]
8 Hb_039650_010 0.129536465 - - cellulose synthase-like protein [Populus tomentosa]
9 Hb_000117_110 0.1347875385 - - transferase, putative [Ricinus communis]
10 Hb_000522_020 0.1411221934 - - PREDICTED: two-pore potassium channel 1 [Jatropha curcas]
11 Hb_001031_020 0.141403001 - - hypothetical protein VITISV_000631 [Vitis vinifera]
12 Hb_002890_060 0.1416692715 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Eucalyptus grandis]
13 Hb_000398_200 0.1468562595 - - PREDICTED: uncharacterized protein LOC105631579 [Jatropha curcas]
14 Hb_000318_460 0.1492546814 - - hypothetical protein CICLE_v10028333mg [Citrus clementina]
15 Hb_002025_370 0.1560568297 - - monooxygenase, putative [Ricinus communis]
16 Hb_000039_100 0.1595808896 - - PREDICTED: uncharacterized protein LOC105649440 [Jatropha curcas]
17 Hb_003376_150 0.1618454384 - - PREDICTED: peroxidase 21 [Jatropha curcas]
18 Hb_004940_090 0.1639565764 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
19 Hb_011925_010 0.1646184263 - - PREDICTED: putative disease resistance protein RGA1 isoform X1 [Jatropha curcas]
20 Hb_003847_140 0.1670500249 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000119_050 Hb_000119_050 Hb_001850_010 Hb_001850_010 Hb_000119_050--Hb_001850_010 Hb_001274_040 Hb_001274_040 Hb_000119_050--Hb_001274_040 Hb_000767_040 Hb_000767_040 Hb_000119_050--Hb_000767_040 Hb_030873_010 Hb_030873_010 Hb_000119_050--Hb_030873_010 Hb_000111_130 Hb_000111_130 Hb_000119_050--Hb_000111_130 Hb_005081_060 Hb_005081_060 Hb_000119_050--Hb_005081_060 Hb_004940_090 Hb_004940_090 Hb_001850_010--Hb_004940_090 Hb_000522_020 Hb_000522_020 Hb_001850_010--Hb_000522_020 Hb_039650_010 Hb_039650_010 Hb_001850_010--Hb_039650_010 Hb_001850_010--Hb_030873_010 Hb_015473_020 Hb_015473_020 Hb_001850_010--Hb_015473_020 Hb_001274_040--Hb_000111_130 Hb_002890_060 Hb_002890_060 Hb_001274_040--Hb_002890_060 Hb_000039_100 Hb_000039_100 Hb_001274_040--Hb_000039_100 Hb_001274_040--Hb_000767_040 Hb_000318_460 Hb_000318_460 Hb_001274_040--Hb_000318_460 Hb_008707_020 Hb_008707_020 Hb_001274_040--Hb_008707_020 Hb_066262_010 Hb_066262_010 Hb_000767_040--Hb_066262_010 Hb_000767_040--Hb_005081_060 Hb_000767_040--Hb_000111_130 Hb_003847_140 Hb_003847_140 Hb_000767_040--Hb_003847_140 Hb_030873_010--Hb_000522_020 Hb_007590_040 Hb_007590_040 Hb_030873_010--Hb_007590_040 Hb_030873_010--Hb_015473_020 Hb_028487_080 Hb_028487_080 Hb_030873_010--Hb_028487_080 Hb_000111_130--Hb_002890_060 Hb_000003_620 Hb_000003_620 Hb_000111_130--Hb_000003_620 Hb_001365_040 Hb_001365_040 Hb_000111_130--Hb_001365_040 Hb_009778_030 Hb_009778_030 Hb_000111_130--Hb_009778_030 Hb_000146_110 Hb_000146_110 Hb_000111_130--Hb_000146_110 Hb_005081_060--Hb_003847_140 Hb_005081_060--Hb_039650_010 Hb_000656_360 Hb_000656_360 Hb_005081_060--Hb_000656_360 Hb_005081_060--Hb_001274_040 Hb_005081_060--Hb_008707_020 Hb_001437_200 Hb_001437_200 Hb_005081_060--Hb_001437_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 10.1323 0.0699469 0.615778 0.0461569 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.750798 0.930742

CAGE analysis