Hb_005999_010

Information

Type -
Description -
Location Contig5999: 210-3827
Sequence    

Annotation

kegg
ID pop:POPTR_0013s02870g
description POPTRDRAFT_893973; hypothetical protein
nr
ID XP_010111871.1
description Sugar transporter ERD6-like 5 [Morus notabilis]
swissprot
ID Q9M0Z9
description Sugar transporter ERD6-like 15 OS=Arabidopsis thaliana GN=At4g04760 PE=3 SV=2
trembl
ID W9S966
description Sugar transporter ERD6-like 5 OS=Morus notabilis GN=L484_020664 PE=3 SV=1
Gene Ontology
ID GO:0016021
description sugar transporter erd6-like 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005999_010 0.0 - - Sugar transporter ERD6-like 5 [Morus notabilis]
2 Hb_000856_120 0.2186675079 transcription factor TF Family: LOB PREDICTED: myb-like protein M [Pyrus x bretschneideri]
3 Hb_002232_050 0.2208814057 - - PREDICTED: uncharacterized protein LOC104214925 [Nicotiana sylvestris]
4 Hb_000417_030 0.222291187 transcription factor TF Family: G2-like PREDICTED: putative two-component response regulator ARR19 [Jatropha curcas]
5 Hb_001579_170 0.2315998928 - - unnamed protein product [Vitis vinifera]
6 Hb_006718_040 0.2337185652 - - PREDICTED: starch synthase 3, chloroplastic/amyloplastic isoform X1 [Jatropha curcas]
7 Hb_001946_060 0.2374854342 - - PREDICTED: TBC1 domain family member 13-like isoform X1 [Jatropha curcas]
8 Hb_120268_010 0.242565165 - - PREDICTED: chitin elicitor receptor kinase 1-like isoform X3 [Populus euphratica]
9 Hb_007709_010 0.245711225 - - -
10 Hb_002475_130 0.2496942496 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 4 [Jatropha curcas]
11 Hb_004021_120 0.2514429798 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
12 Hb_011174_100 0.2529812776 - - ubiquitin-protein ligase, putative [Ricinus communis]
13 Hb_002518_270 0.2531225204 - - glycogen phosphorylase, putative [Ricinus communis]
14 Hb_002375_050 0.2531309191 - - PREDICTED: uncharacterized protein LOC104878039 [Vitis vinifera]
15 Hb_004545_100 0.2568729222 - - PREDICTED: protein BONZAI 3 [Jatropha curcas]
16 Hb_000808_220 0.2636841186 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump 1-like [Jatropha curcas]
17 Hb_001769_030 0.2637184123 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
18 Hb_003337_050 0.2646036125 - - PREDICTED: probable protein phosphatase 2C 78 [Jatropha curcas]
19 Hb_000203_060 0.2650727254 transcription factor TF Family: G2-like hypothetical protein POPTR_0004s05660g [Populus trichocarpa]
20 Hb_001711_040 0.2662449027 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_005999_010 Hb_005999_010 Hb_000856_120 Hb_000856_120 Hb_005999_010--Hb_000856_120 Hb_002232_050 Hb_002232_050 Hb_005999_010--Hb_002232_050 Hb_000417_030 Hb_000417_030 Hb_005999_010--Hb_000417_030 Hb_001579_170 Hb_001579_170 Hb_005999_010--Hb_001579_170 Hb_006718_040 Hb_006718_040 Hb_005999_010--Hb_006718_040 Hb_001946_060 Hb_001946_060 Hb_005999_010--Hb_001946_060 Hb_001863_410 Hb_001863_410 Hb_000856_120--Hb_001863_410 Hb_001711_040 Hb_001711_040 Hb_000856_120--Hb_001711_040 Hb_003442_120 Hb_003442_120 Hb_000856_120--Hb_003442_120 Hb_009780_010 Hb_009780_010 Hb_000856_120--Hb_009780_010 Hb_118046_010 Hb_118046_010 Hb_000856_120--Hb_118046_010 Hb_002475_130 Hb_002475_130 Hb_002232_050--Hb_002475_130 Hb_001921_010 Hb_001921_010 Hb_002232_050--Hb_001921_010 Hb_001227_040 Hb_001227_040 Hb_002232_050--Hb_001227_040 Hb_002232_050--Hb_006718_040 Hb_000333_120 Hb_000333_120 Hb_002232_050--Hb_000333_120 Hb_002232_050--Hb_001946_060 Hb_001514_100 Hb_001514_100 Hb_000417_030--Hb_001514_100 Hb_002294_010 Hb_002294_010 Hb_000417_030--Hb_002294_010 Hb_012018_020 Hb_012018_020 Hb_000417_030--Hb_012018_020 Hb_004230_060 Hb_004230_060 Hb_000417_030--Hb_004230_060 Hb_000002_100 Hb_000002_100 Hb_000417_030--Hb_000002_100 Hb_010962_030 Hb_010962_030 Hb_000417_030--Hb_010962_030 Hb_002518_270 Hb_002518_270 Hb_001579_170--Hb_002518_270 Hb_001579_170--Hb_001946_060 Hb_000421_020 Hb_000421_020 Hb_001579_170--Hb_000421_020 Hb_005186_090 Hb_005186_090 Hb_001579_170--Hb_005186_090 Hb_010578_050 Hb_010578_050 Hb_001579_170--Hb_010578_050 Hb_001769_030 Hb_001769_030 Hb_001579_170--Hb_001769_030 Hb_003106_210 Hb_003106_210 Hb_006718_040--Hb_003106_210 Hb_000067_030 Hb_000067_030 Hb_006718_040--Hb_000067_030 Hb_006718_040--Hb_002518_270 Hb_011174_100 Hb_011174_100 Hb_006718_040--Hb_011174_100 Hb_006501_170 Hb_006501_170 Hb_006718_040--Hb_006501_170 Hb_002218_070 Hb_002218_070 Hb_006718_040--Hb_002218_070 Hb_000163_250 Hb_000163_250 Hb_001946_060--Hb_000163_250 Hb_001085_230 Hb_001085_230 Hb_001946_060--Hb_001085_230 Hb_007919_030 Hb_007919_030 Hb_001946_060--Hb_007919_030 Hb_000037_010 Hb_000037_010 Hb_001946_060--Hb_000037_010 Hb_000808_220 Hb_000808_220 Hb_001946_060--Hb_000808_220 Hb_001946_060--Hb_002518_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.131184 1.27809 0.321415 0 0.124324 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.673813 0.395652

CAGE analysis