Hb_004767_020

Information

Type -
Description -
Location Contig4767: 14015-17378
Sequence    

Annotation

kegg
ID rcu:RCOM_0476170
description Lysosomal Pro-X carboxypeptidase, putative (EC:3.4.16.2)
nr
ID XP_002523750.1
description Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
swissprot
ID Q2TA14
description Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=PRCP PE=2 SV=1
trembl
ID B9SCN1
description Lysosomal Pro-X carboxypeptidase, putative OS=Ricinus communis GN=RCOM_0476170 PE=4 SV=1
Gene Ontology
ID GO:0004180
description lysosomal pro-x carboxypeptidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004767_020 0.0 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
2 Hb_064293_010 0.1115774993 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
3 Hb_119327_010 0.1227590962 - - hypothetical protein POPTR_0075s00200g, partial [Populus trichocarpa]
4 Hb_002849_120 0.1327505088 - - ferric reductase oxidase [Manihot esculenta]
5 Hb_171168_010 0.1397644046 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
6 Hb_007113_020 0.1400075717 - - -
7 Hb_000680_020 0.1408519926 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
8 Hb_003849_030 0.1412665725 - - hypothetical protein AALP_AA5G029900 [Arabis alpina]
9 Hb_010614_010 0.1415336044 - - leucine-rich repeat transmembrane protein kinase [Populus trichocarpa]
10 Hb_003683_200 0.1423458127 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
11 Hb_004525_020 0.1423908643 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 6-like [Jatropha curcas]
12 Hb_033153_040 0.1519592058 - - o-methyltransferase, putative [Ricinus communis]
13 Hb_006827_030 0.1531565946 - - oligopeptide transporter, putative [Ricinus communis]
14 Hb_127661_010 0.1558908413 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_001501_020 0.1564500815 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
16 Hb_031201_010 0.1568500574 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
17 Hb_000025_590 0.159133791 - - PREDICTED: cytochrome P450 94A1-like isoform X1 [Jatropha curcas]
18 Hb_001836_010 0.1592288921 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 [Jatropha curcas]
19 Hb_003680_010 0.1592936439 - - UDP-glucosyltransferase, putative [Ricinus communis]
20 Hb_000261_370 0.1613995693 - - -

Gene co-expression network

sample Hb_004767_020 Hb_004767_020 Hb_064293_010 Hb_064293_010 Hb_004767_020--Hb_064293_010 Hb_119327_010 Hb_119327_010 Hb_004767_020--Hb_119327_010 Hb_002849_120 Hb_002849_120 Hb_004767_020--Hb_002849_120 Hb_171168_010 Hb_171168_010 Hb_004767_020--Hb_171168_010 Hb_007113_020 Hb_007113_020 Hb_004767_020--Hb_007113_020 Hb_000680_020 Hb_000680_020 Hb_004767_020--Hb_000680_020 Hb_033153_040 Hb_033153_040 Hb_064293_010--Hb_033153_040 Hb_064293_010--Hb_002849_120 Hb_000049_290 Hb_000049_290 Hb_064293_010--Hb_000049_290 Hb_000331_220 Hb_000331_220 Hb_064293_010--Hb_000331_220 Hb_000025_590 Hb_000025_590 Hb_064293_010--Hb_000025_590 Hb_031201_010 Hb_031201_010 Hb_119327_010--Hb_031201_010 Hb_008494_090 Hb_008494_090 Hb_119327_010--Hb_008494_090 Hb_000203_210 Hb_000203_210 Hb_119327_010--Hb_000203_210 Hb_004864_010 Hb_004864_010 Hb_119327_010--Hb_004864_010 Hb_007205_020 Hb_007205_020 Hb_119327_010--Hb_007205_020 Hb_002849_120--Hb_033153_040 Hb_001153_090 Hb_001153_090 Hb_002849_120--Hb_001153_090 Hb_003849_030 Hb_003849_030 Hb_002849_120--Hb_003849_030 Hb_002849_120--Hb_000680_020 Hb_001160_020 Hb_001160_020 Hb_002849_120--Hb_001160_020 Hb_127661_010 Hb_127661_010 Hb_002849_120--Hb_127661_010 Hb_006827_030 Hb_006827_030 Hb_171168_010--Hb_006827_030 Hb_171168_010--Hb_007113_020 Hb_001579_060 Hb_001579_060 Hb_171168_010--Hb_001579_060 Hb_002155_020 Hb_002155_020 Hb_171168_010--Hb_002155_020 Hb_002030_090 Hb_002030_090 Hb_171168_010--Hb_002030_090 Hb_000049_170 Hb_000049_170 Hb_171168_010--Hb_000049_170 Hb_000261_370 Hb_000261_370 Hb_007113_020--Hb_000261_370 Hb_001501_020 Hb_001501_020 Hb_007113_020--Hb_001501_020 Hb_007113_020--Hb_006827_030 Hb_007113_020--Hb_003849_030 Hb_007113_020--Hb_127661_010 Hb_003683_200 Hb_003683_200 Hb_000680_020--Hb_003683_200 Hb_000680_020--Hb_033153_040 Hb_000680_020--Hb_127661_010 Hb_071130_020 Hb_071130_020 Hb_000680_020--Hb_071130_020 Hb_003077_140 Hb_003077_140 Hb_000680_020--Hb_003077_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.254835 0.236022 0.094346 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0321164 0 0 0.141243 0.316826

CAGE analysis