Hb_003579_050

Information

Type -
Description -
Location Contig3579: 59909-63721
Sequence    

Annotation

kegg
ID rcu:RCOM_1035790
description 14-3-3 protein, putative
nr
ID XP_012067879.1
description PREDICTED: 14-3-3 protein 7 [Jatropha curcas]
swissprot
ID P93212
description 14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2
trembl
ID A0A067KYZ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15794 PE=3 SV=1
Gene Ontology
ID GO:0019904
description 14-3-3-like partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36869: 59960-63655
cDNA
(Sanger)
(ID:Location)		 001_E21.ab1: 60903-63571 , 018_M21.ab1: 60885-63571

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003579_050 0.0 - - PREDICTED: 14-3-3 protein 7 [Jatropha curcas]
2 Hb_000260_680 0.0695891137 - - PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-A [Jatropha curcas]
3 Hb_004128_200 0.0720900208 - - PREDICTED: uncharacterized protein LOC105642137 [Jatropha curcas]
4 Hb_027073_030 0.073671087 - - PREDICTED: mediator of RNA polymerase II transcription subunit 27 [Jatropha curcas]
5 Hb_001776_060 0.0749730891 - - PREDICTED: methyl-CpG-binding domain-containing protein 5-like [Jatropha curcas]
6 Hb_000107_030 0.0774789614 - - conserved hypothetical protein [Ricinus communis]
7 Hb_027472_120 0.0775348077 - - PREDICTED: thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial isoform X1 [Jatropha curcas]
8 Hb_005975_010 0.0789672318 - - [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase, putative [Ricinus communis]
9 Hb_002067_030 0.0799011868 - - PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X2 [Jatropha curcas]
10 Hb_000576_050 0.0803931214 - - Kinase superfamily protein [Theobroma cacao]
11 Hb_001186_090 0.0832393517 - - PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 2 [Jatropha curcas]
12 Hb_000002_120 0.0841402501 - - PREDICTED: uncharacterized protein LOC105782064 [Gossypium raimondii]
13 Hb_007982_080 0.0864521662 - - PREDICTED: uncharacterized protein LOC105636531 [Jatropha curcas]
14 Hb_020367_050 0.0871333324 rubber biosynthesis Gene Name: Geranyl geranyl diphosphate synthase geranylgeranyl pyrophosphate synthase, putative [Ricinus communis]
15 Hb_002928_010 0.0878622435 - - PREDICTED: WD repeat-containing protein DWA2 [Jatropha curcas]
16 Hb_000331_110 0.0879805582 - - Conserved oligomeric Golgi complex component, putative [Ricinus communis]
17 Hb_002311_310 0.0882331589 - - PREDICTED: uncharacterized protein LOC100246622 [Vitis vinifera]
18 Hb_000144_070 0.0887959662 - - conserved hypothetical protein [Ricinus communis]
19 Hb_079526_030 0.0889332428 - - PREDICTED: uncharacterized protein LOC105638120 [Jatropha curcas]
20 Hb_058972_010 0.0908641019 - - PREDICTED: uncharacterized protein LOC105644404 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_003579_050 Hb_003579_050 Hb_000260_680 Hb_000260_680 Hb_003579_050--Hb_000260_680 Hb_004128_200 Hb_004128_200 Hb_003579_050--Hb_004128_200 Hb_027073_030 Hb_027073_030 Hb_003579_050--Hb_027073_030 Hb_001776_060 Hb_001776_060 Hb_003579_050--Hb_001776_060 Hb_000107_030 Hb_000107_030 Hb_003579_050--Hb_000107_030 Hb_027472_120 Hb_027472_120 Hb_003579_050--Hb_027472_120 Hb_000260_680--Hb_001776_060 Hb_000331_110 Hb_000331_110 Hb_000260_680--Hb_000331_110 Hb_002217_110 Hb_002217_110 Hb_000260_680--Hb_002217_110 Hb_079526_030 Hb_079526_030 Hb_000260_680--Hb_079526_030 Hb_001153_210 Hb_001153_210 Hb_000260_680--Hb_001153_210 Hb_005779_010 Hb_005779_010 Hb_000260_680--Hb_005779_010 Hb_011249_030 Hb_011249_030 Hb_004128_200--Hb_011249_030 Hb_004128_200--Hb_027073_030 Hb_001005_020 Hb_001005_020 Hb_004128_200--Hb_001005_020 Hb_001277_280 Hb_001277_280 Hb_004128_200--Hb_001277_280 Hb_039605_010 Hb_039605_010 Hb_004128_200--Hb_039605_010 Hb_002928_010 Hb_002928_010 Hb_027073_030--Hb_002928_010 Hb_000139_190 Hb_000139_190 Hb_027073_030--Hb_000139_190 Hb_027073_030--Hb_039605_010 Hb_000576_050 Hb_000576_050 Hb_027073_030--Hb_000576_050 Hb_012384_030 Hb_012384_030 Hb_001776_060--Hb_012384_030 Hb_000144_070 Hb_000144_070 Hb_001776_060--Hb_000144_070 Hb_032202_080 Hb_032202_080 Hb_001776_060--Hb_032202_080 Hb_001776_060--Hb_002217_110 Hb_007290_030 Hb_007290_030 Hb_001776_060--Hb_007290_030 Hb_005588_030 Hb_005588_030 Hb_000107_030--Hb_005588_030 Hb_005144_090 Hb_005144_090 Hb_000107_030--Hb_005144_090 Hb_000836_170 Hb_000836_170 Hb_000107_030--Hb_000836_170 Hb_001186_090 Hb_001186_090 Hb_000107_030--Hb_001186_090 Hb_073973_130 Hb_073973_130 Hb_000107_030--Hb_073973_130 Hb_002311_310 Hb_002311_310 Hb_027472_120--Hb_002311_310 Hb_004007_220 Hb_004007_220 Hb_027472_120--Hb_004007_220 Hb_001005_030 Hb_001005_030 Hb_027472_120--Hb_001005_030 Hb_001821_160 Hb_001821_160 Hb_027472_120--Hb_001821_160 Hb_150651_030 Hb_150651_030 Hb_027472_120--Hb_150651_030 Hb_000915_080 Hb_000915_080 Hb_027472_120--Hb_000915_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
74.9684 48.8046 121.64 38.1735 80.7278 59.4217
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
45.1231 59.9556 36.9079 46.6418 44.0199

CAGE analysis