Hb_150651_030

Information

Type -
Description -
Location Contig150651: 13506-17087
Sequence    

Annotation

kegg
ID rcu:RCOM_1832930
description hypothetical protein
nr
ID XP_012092753.1
description PREDICTED: metallophosphoesterase 1-like [Jatropha curcas]
swissprot
ID B1WC86
description Metallophosphoesterase 1 OS=Rattus norvegicus GN=Mppe1 PE=2 SV=1
trembl
ID A0A067JJS4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09857 PE=4 SV=1
Gene Ontology
ID GO:0016787
description metallophosphoesterase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12689: 13797-15994 , PASA_asmbl_12690: 14647-15089
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_150651_030 0.0 - - PREDICTED: metallophosphoesterase 1-like [Jatropha curcas]
2 Hb_004032_410 0.0725938312 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 5 isoform X2 [Jatropha curcas]
3 Hb_027472_120 0.0765345498 - - PREDICTED: thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial isoform X1 [Jatropha curcas]
4 Hb_034432_030 0.0796086837 - - PREDICTED: probable glycosyltransferase At5g20260 isoform X1 [Jatropha curcas]
5 Hb_000544_010 0.0796097012 - - PREDICTED: GPI mannosyltransferase 1 [Jatropha curcas]
6 Hb_001379_110 0.0798697913 - - PREDICTED: sec1 family domain-containing protein MIP3 [Jatropha curcas]
7 Hb_012490_060 0.0800592385 - - PREDICTED: UBP1-associated proteins 1C isoform X1 [Jatropha curcas]
8 Hb_000915_080 0.0824417044 - - PREDICTED: uncharacterized protein LOC105628777 [Jatropha curcas]
9 Hb_002093_030 0.0827482186 - - PREDICTED: uncharacterized protein LOC105648523 [Jatropha curcas]
10 Hb_002749_110 0.0856392586 - - PREDICTED: uncharacterized protein LOC105636001 isoform X1 [Jatropha curcas]
11 Hb_003018_130 0.0868659857 - - PREDICTED: uncharacterized protein LOC105628777 [Jatropha curcas]
12 Hb_000007_280 0.0887238844 - - hypothetical protein VITISV_000066 [Vitis vinifera]
13 Hb_003126_100 0.0914576846 - - hypothetical protein POPTR_0005s11280g [Populus trichocarpa]
14 Hb_000922_020 0.0939338885 - - protein binding protein, putative [Ricinus communis]
15 Hb_030312_080 0.0944499858 - - calcium-dependent protein kinase 6 [Hevea brasiliensis]
16 Hb_001005_030 0.0948392039 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X3 [Jatropha curcas]
17 Hb_000665_160 0.0962169617 - - PREDICTED: cysteine--tRNA ligase, cytoplasmic isoform X1 [Jatropha curcas]
18 Hb_001821_160 0.0977765239 - - serine/arginine rich splicing factor, putative [Ricinus communis]
19 Hb_000076_130 0.0981769237 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
20 Hb_008887_020 0.0992173555 - - PREDICTED: uncharacterized protein LOC105636191 [Jatropha curcas]

Gene co-expression network

sample Hb_150651_030 Hb_150651_030 Hb_004032_410 Hb_004032_410 Hb_150651_030--Hb_004032_410 Hb_027472_120 Hb_027472_120 Hb_150651_030--Hb_027472_120 Hb_034432_030 Hb_034432_030 Hb_150651_030--Hb_034432_030 Hb_000544_010 Hb_000544_010 Hb_150651_030--Hb_000544_010 Hb_001379_110 Hb_001379_110 Hb_150651_030--Hb_001379_110 Hb_012490_060 Hb_012490_060 Hb_150651_030--Hb_012490_060 Hb_003440_060 Hb_003440_060 Hb_004032_410--Hb_003440_060 Hb_001489_050 Hb_001489_050 Hb_004032_410--Hb_001489_050 Hb_004032_410--Hb_000544_010 Hb_000076_130 Hb_000076_130 Hb_004032_410--Hb_000076_130 Hb_000915_080 Hb_000915_080 Hb_004032_410--Hb_000915_080 Hb_002311_310 Hb_002311_310 Hb_027472_120--Hb_002311_310 Hb_004007_220 Hb_004007_220 Hb_027472_120--Hb_004007_220 Hb_001005_030 Hb_001005_030 Hb_027472_120--Hb_001005_030 Hb_001821_160 Hb_001821_160 Hb_027472_120--Hb_001821_160 Hb_027472_120--Hb_000915_080 Hb_034432_030--Hb_001379_110 Hb_001047_220 Hb_001047_220 Hb_034432_030--Hb_001047_220 Hb_034432_030--Hb_000544_010 Hb_011618_080 Hb_011618_080 Hb_034432_030--Hb_011618_080 Hb_000975_040 Hb_000975_040 Hb_034432_030--Hb_000975_040 Hb_012053_080 Hb_012053_080 Hb_034432_030--Hb_012053_080 Hb_000665_160 Hb_000665_160 Hb_000544_010--Hb_000665_160 Hb_000544_010--Hb_000076_130 Hb_006445_010 Hb_006445_010 Hb_000544_010--Hb_006445_010 Hb_000544_010--Hb_001379_110 Hb_002749_110 Hb_002749_110 Hb_000544_010--Hb_002749_110 Hb_001379_110--Hb_001047_220 Hb_001379_110--Hb_000975_040 Hb_000958_140 Hb_000958_140 Hb_001379_110--Hb_000958_140 Hb_027380_140 Hb_027380_140 Hb_001379_110--Hb_027380_140 Hb_001504_040 Hb_001504_040 Hb_012490_060--Hb_001504_040 Hb_005488_150 Hb_005488_150 Hb_012490_060--Hb_005488_150 Hb_000563_130 Hb_000563_130 Hb_012490_060--Hb_000563_130 Hb_012490_060--Hb_012053_080 Hb_002641_130 Hb_002641_130 Hb_012490_060--Hb_002641_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.9574 8.46655 14.0375 8.74738 22.1125 15.4452
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.77515 8.51222 7.58804 9.16825 14.3884

CAGE analysis