Hb_002686_300

Information

Type -
Description -
Location Contig2686: 215995-220484
Sequence    

Annotation

kegg
ID rcu:RCOM_1122480
description adenosine diphosphatase, putative (EC:3.6.1.15)
nr
ID XP_002525470.1
description adenosine diphosphatase, putative [Ricinus communis]
swissprot
ID Q9SPM5
description Apyrase 2 OS=Arabidopsis thaliana GN=APY2 PE=1 SV=1
trembl
ID B9SHK1
description Adenosine diphosphatase, putative OS=Ricinus communis GN=RCOM_1122480 PE=3 SV=1
Gene Ontology
ID GO:0017111
description apyrase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28041: 215996-220347 , PASA_asmbl_28042: 221123-221366
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002686_300 0.0 - - adenosine diphosphatase, putative [Ricinus communis]
2 Hb_003687_080 0.1020541615 - - PREDICTED: casein kinase I-like [Jatropha curcas]
3 Hb_006846_170 0.1034674725 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Jatropha curcas]
4 Hb_000260_490 0.1039310519 - - PREDICTED: probable galacturonosyltransferase 7 isoform X3 [Jatropha curcas]
5 Hb_004013_030 0.1041975066 - - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative [Ricinus communis]
6 Hb_002249_020 0.1043409395 - - PREDICTED: dual specificity protein phosphatase PHS1 [Jatropha curcas]
7 Hb_003228_100 0.1051368217 - - PREDICTED: kinesin-related protein 4 [Jatropha curcas]
8 Hb_004907_090 0.10586663 - - ATP binding protein, putative [Ricinus communis]
9 Hb_000155_170 0.1097240826 transcription factor TF Family: VOZ hypothetical protein EUTSA_v10007498mg [Eutrema salsugineum]
10 Hb_000001_090 0.1101284287 - - PREDICTED: uncharacterized protein At3g58460 [Populus euphratica]
11 Hb_000724_020 0.1104987104 transcription factor TF Family: PHD PREDICTED: probable Histone-lysine N-methyltransferase ATXR5 [Jatropha curcas]
12 Hb_000318_220 0.1111435905 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001799_160 0.1112096159 - - PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X2 [Jatropha curcas]
14 Hb_000562_070 0.1123109869 - - PREDICTED: uncharacterized protein LOC105635371 isoform X1 [Jatropha curcas]
15 Hb_006588_160 0.1136772011 - - PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic isoform X2 [Jatropha curcas]
16 Hb_025668_010 0.1140637893 - - unnamed protein product [Coffea canephora]
17 Hb_001279_090 0.1147330477 - - PREDICTED: uncharacterized protein LOC105633322 [Jatropha curcas]
18 Hb_074399_010 0.1156646606 - - PREDICTED: phragmoplast orienting kinesin-1 isoform X1 [Populus euphratica]
19 Hb_029584_120 0.1157727618 - - PREDICTED: K(+) efflux antiporter 4 isoform X1 [Jatropha curcas]
20 Hb_001053_080 0.1160261596 - - OsCesA3 protein [Morus notabilis]

Gene co-expression network

sample Hb_002686_300 Hb_002686_300 Hb_003687_080 Hb_003687_080 Hb_002686_300--Hb_003687_080 Hb_006846_170 Hb_006846_170 Hb_002686_300--Hb_006846_170 Hb_000260_490 Hb_000260_490 Hb_002686_300--Hb_000260_490 Hb_004013_030 Hb_004013_030 Hb_002686_300--Hb_004013_030 Hb_002249_020 Hb_002249_020 Hb_002686_300--Hb_002249_020 Hb_003228_100 Hb_003228_100 Hb_002686_300--Hb_003228_100 Hb_001160_110 Hb_001160_110 Hb_003687_080--Hb_001160_110 Hb_000327_330 Hb_000327_330 Hb_003687_080--Hb_000327_330 Hb_074399_010 Hb_074399_010 Hb_003687_080--Hb_074399_010 Hb_000001_090 Hb_000001_090 Hb_003687_080--Hb_000001_090 Hb_005511_130 Hb_005511_130 Hb_003687_080--Hb_005511_130 Hb_000318_220 Hb_000318_220 Hb_003687_080--Hb_000318_220 Hb_006846_170--Hb_002249_020 Hb_000788_030 Hb_000788_030 Hb_006846_170--Hb_000788_030 Hb_006846_170--Hb_003228_100 Hb_000975_210 Hb_000975_210 Hb_006846_170--Hb_000975_210 Hb_088584_010 Hb_088584_010 Hb_006846_170--Hb_088584_010 Hb_023344_140 Hb_023344_140 Hb_006846_170--Hb_023344_140 Hb_000042_110 Hb_000042_110 Hb_000260_490--Hb_000042_110 Hb_000260_490--Hb_003687_080 Hb_007919_110 Hb_007919_110 Hb_000260_490--Hb_007919_110 Hb_000260_490--Hb_074399_010 Hb_000260_490--Hb_005511_130 Hb_006588_160 Hb_006588_160 Hb_004013_030--Hb_006588_160 Hb_000154_050 Hb_000154_050 Hb_004013_030--Hb_000154_050 Hb_006816_190 Hb_006816_190 Hb_004013_030--Hb_006816_190 Hb_001450_020 Hb_001450_020 Hb_004013_030--Hb_001450_020 Hb_000331_140 Hb_000331_140 Hb_004013_030--Hb_000331_140 Hb_004013_030--Hb_074399_010 Hb_000640_190 Hb_000640_190 Hb_002249_020--Hb_000640_190 Hb_003449_100 Hb_003449_100 Hb_002249_020--Hb_003449_100 Hb_003925_060 Hb_003925_060 Hb_002249_020--Hb_003925_060 Hb_006022_010 Hb_006022_010 Hb_002249_020--Hb_006022_010 Hb_002249_020--Hb_003228_100 Hb_000012_270 Hb_000012_270 Hb_003228_100--Hb_000012_270 Hb_002870_020 Hb_002870_020 Hb_003228_100--Hb_002870_020 Hb_004032_370 Hb_004032_370 Hb_003228_100--Hb_004032_370 Hb_002326_110 Hb_002326_110 Hb_003228_100--Hb_002326_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.7245 14.4903 34.9433 28.0421 17.2475 6.23365
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.79415 4.59099 8.90851 8.84356 23.2642

CAGE analysis