Hb_002311_300

Information

Type -
Description -
Location Contig2311: 151016-152531
Sequence    

Annotation

kegg
ID rcu:RCOM_0682650
description hypothetical protein
nr
ID XP_012084247.1
description PREDICTED: J protein JJJ2 [Jatropha curcas]
swissprot
ID Q9FH28
description Chaperone protein dnaJ 49 OS=Arabidopsis thaliana GN=ATJ49 PE=2 SV=2
trembl
ID A0A067JVE0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18932 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24324: 151948-152362
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002311_300 0.0 - - PREDICTED: J protein JJJ2 [Jatropha curcas]
2 Hb_002411_060 0.2087521981 - - PREDICTED: 65-kDa microtubule-associated protein 5 [Jatropha curcas]
3 Hb_003929_100 0.2196606458 transcription factor TF Family: M-type PREDICTED: agamous-like MADS-box protein AGL61 [Populus euphratica]
4 Hb_000740_040 0.2210198542 - - PREDICTED: uncharacterized protein LOC105126082 [Populus euphratica]
5 Hb_000005_110 0.2238392056 - - histone H2B1 [Hevea brasiliensis]
6 Hb_005690_030 0.2304789449 - - hypothetical protein VITISV_020378 [Vitis vinifera]
7 Hb_003362_080 0.2326322691 - - beta-galactosidase, putative [Ricinus communis]
8 Hb_000500_350 0.2358134747 - - PREDICTED: uncharacterized protein LOC105649734 [Jatropha curcas]
9 Hb_002837_050 0.2374926621 - - hypothetical protein POPTR_0006s00550g [Populus trichocarpa]
10 Hb_005914_050 0.2401157349 - - PREDICTED: 50S ribosomal protein L28, chloroplastic [Jatropha curcas]
11 Hb_001329_090 0.2408177889 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000684_120 0.2415249917 - - PREDICTED: uncharacterized protein LOC105642190 isoform X2 [Jatropha curcas]
13 Hb_003758_020 0.243235693 - - UGTPg34 [Panax ginseng]
14 Hb_001096_130 0.2440014728 - - PREDICTED: RING-H2 finger protein ATL7-like isoform X1 [Jatropha curcas]
15 Hb_169116_010 0.2444140829 - - PREDICTED: fatty-acid-binding protein 1 [Jatropha curcas]
16 Hb_000035_240 0.2454257594 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001114_160 0.2460674649 - - PREDICTED: beta carbonic anhydrase 5, chloroplastic [Jatropha curcas]
18 Hb_000008_370 0.2460733188 - - PREDICTED: uncharacterized protein LOC105628095 [Jatropha curcas]
19 Hb_084230_010 0.246943372 - - PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X4 [Jatropha curcas]
20 Hb_079513_010 0.2477152919 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_002311_300 Hb_002311_300 Hb_002411_060 Hb_002411_060 Hb_002311_300--Hb_002411_060 Hb_003929_100 Hb_003929_100 Hb_002311_300--Hb_003929_100 Hb_000740_040 Hb_000740_040 Hb_002311_300--Hb_000740_040 Hb_000005_110 Hb_000005_110 Hb_002311_300--Hb_000005_110 Hb_005690_030 Hb_005690_030 Hb_002311_300--Hb_005690_030 Hb_003362_080 Hb_003362_080 Hb_002311_300--Hb_003362_080 Hb_000684_120 Hb_000684_120 Hb_002411_060--Hb_000684_120 Hb_004162_230 Hb_004162_230 Hb_002411_060--Hb_004162_230 Hb_004449_040 Hb_004449_040 Hb_002411_060--Hb_004449_040 Hb_000345_260 Hb_000345_260 Hb_002411_060--Hb_000345_260 Hb_002837_050 Hb_002837_050 Hb_002411_060--Hb_002837_050 Hb_004117_190 Hb_004117_190 Hb_002411_060--Hb_004117_190 Hb_068194_010 Hb_068194_010 Hb_003929_100--Hb_068194_010 Hb_003929_100--Hb_000005_110 Hb_000331_350 Hb_000331_350 Hb_003929_100--Hb_000331_350 Hb_000176_150 Hb_000176_150 Hb_003929_100--Hb_000176_150 Hb_001250_070 Hb_001250_070 Hb_003929_100--Hb_001250_070 Hb_003126_130 Hb_003126_130 Hb_003929_100--Hb_003126_130 Hb_001073_080 Hb_001073_080 Hb_000740_040--Hb_001073_080 Hb_118282_010 Hb_118282_010 Hb_000740_040--Hb_118282_010 Hb_001329_090 Hb_001329_090 Hb_000740_040--Hb_001329_090 Hb_000740_040--Hb_000005_110 Hb_000035_240 Hb_000035_240 Hb_000740_040--Hb_000035_240 Hb_000740_040--Hb_003126_130 Hb_000345_460 Hb_000345_460 Hb_000005_110--Hb_000345_460 Hb_000364_170 Hb_000364_170 Hb_000005_110--Hb_000364_170 Hb_030627_070 Hb_030627_070 Hb_000005_110--Hb_030627_070 Hb_188281_030 Hb_188281_030 Hb_000005_110--Hb_188281_030 Hb_001221_030 Hb_001221_030 Hb_000005_110--Hb_001221_030 Hb_002045_090 Hb_002045_090 Hb_005690_030--Hb_002045_090 Hb_000123_370 Hb_000123_370 Hb_005690_030--Hb_000123_370 Hb_086122_010 Hb_086122_010 Hb_005690_030--Hb_086122_010 Hb_001793_020 Hb_001793_020 Hb_005690_030--Hb_001793_020 Hb_000000_180 Hb_000000_180 Hb_005690_030--Hb_000000_180 Hb_006130_020 Hb_006130_020 Hb_005690_030--Hb_006130_020 Hb_001799_110 Hb_001799_110 Hb_003362_080--Hb_001799_110 Hb_003362_080--Hb_000345_260 Hb_009976_010 Hb_009976_010 Hb_003362_080--Hb_009976_010 Hb_001114_160 Hb_001114_160 Hb_003362_080--Hb_001114_160 Hb_002972_010 Hb_002972_010 Hb_003362_080--Hb_002972_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0978706 0 0.587322 0.3332 0.0327785 0.0826601
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.300886 0.236559 0 0.0480186 0.2354

CAGE analysis