Hb_002301_090

Information

Type -
Description -
Location Contig2301: 93526-95605
Sequence    

Annotation

kegg
ID vvi:100252168
description dnaJ homolog subfamily B member 13
nr
ID XP_012091667.1
description PREDICTED: dnaJ protein homolog 1-like [Jatropha curcas]
swissprot
ID Q9UDY4
description DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1
trembl
ID A0A067JNB8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21480 PE=4 SV=1
Gene Ontology
ID GO:0051082
description dnaj homolog subfamily b member 13-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002301_090 0.0 - - PREDICTED: dnaJ protein homolog 1-like [Jatropha curcas]
2 Hb_002631_190 0.2639744286 transcription factor TF Family: GRAS DELLA protein GAI1, putative [Ricinus communis]
3 Hb_003581_180 0.2676998765 - - Pectate lyase precursor, putative [Ricinus communis]
4 Hb_012092_100 0.2701723659 - - conserved hypothetical protein [Ricinus communis]
5 Hb_008864_100 0.2766953605 - - PREDICTED: uncharacterized protein LOC105631832 isoform X1 [Jatropha curcas]
6 Hb_005276_030 0.292859437 - - PREDICTED: probable inactive patatin-like protein 9 [Jatropha curcas]
7 Hb_003861_030 0.2971363338 - - hypothetical protein JCGZ_16321 [Jatropha curcas]
8 Hb_000925_040 0.3032477533 - - kinase, putative [Ricinus communis]
9 Hb_047560_010 0.3042090586 - - PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
10 Hb_005601_030 0.3054299485 - - organic anion transporter, putative [Ricinus communis]
11 Hb_000179_260 0.3088027273 - - PREDICTED: UBP1-associated proteins 1C isoform X1 [Jatropha curcas]
12 Hb_001391_050 0.3145217391 - - PREDICTED: probable carboxylesterase 18 [Jatropha curcas]
13 Hb_115832_010 0.3190874137 - - transcription factor, putative [Ricinus communis]
14 Hb_000700_030 0.3301938305 - - PREDICTED: zinc finger protein 3 [Jatropha curcas]
15 Hb_025615_010 0.3303261238 - - hypothetical protein JCGZ_19555 [Jatropha curcas]
16 Hb_001377_430 0.3324311522 - - PREDICTED: laccase-6 [Jatropha curcas]
17 Hb_105959_010 0.3325057056 - - asparagine synthetase, putative [Ricinus communis]
18 Hb_148209_030 0.3330528308 - - hypothetical protein VITISV_017120 [Vitis vinifera]
19 Hb_002701_230 0.3330659742 - - PREDICTED: uncharacterized protein LOC105646833 [Jatropha curcas]
20 Hb_000544_160 0.3346282823 - - PREDICTED: phosphomethylethanolamine N-methyltransferase-like [Nelumbo nucifera]

Gene co-expression network

sample Hb_002301_090 Hb_002301_090 Hb_002631_190 Hb_002631_190 Hb_002301_090--Hb_002631_190 Hb_003581_180 Hb_003581_180 Hb_002301_090--Hb_003581_180 Hb_012092_100 Hb_012092_100 Hb_002301_090--Hb_012092_100 Hb_008864_100 Hb_008864_100 Hb_002301_090--Hb_008864_100 Hb_005276_030 Hb_005276_030 Hb_002301_090--Hb_005276_030 Hb_003861_030 Hb_003861_030 Hb_002301_090--Hb_003861_030 Hb_002631_190--Hb_012092_100 Hb_000925_040 Hb_000925_040 Hb_002631_190--Hb_000925_040 Hb_002631_190--Hb_008864_100 Hb_000010_300 Hb_000010_300 Hb_002631_190--Hb_000010_300 Hb_001493_160 Hb_001493_160 Hb_002631_190--Hb_001493_160 Hb_001818_030 Hb_001818_030 Hb_003581_180--Hb_001818_030 Hb_002999_040 Hb_002999_040 Hb_003581_180--Hb_002999_040 Hb_000025_170 Hb_000025_170 Hb_003581_180--Hb_000025_170 Hb_000179_260 Hb_000179_260 Hb_003581_180--Hb_000179_260 Hb_004228_060 Hb_004228_060 Hb_003581_180--Hb_004228_060 Hb_012092_100--Hb_008864_100 Hb_012092_100--Hb_000925_040 Hb_012092_100--Hb_000010_300 Hb_006472_070 Hb_006472_070 Hb_012092_100--Hb_006472_070 Hb_006289_020 Hb_006289_020 Hb_012092_100--Hb_006289_020 Hb_008864_100--Hb_006289_020 Hb_003119_040 Hb_003119_040 Hb_008864_100--Hb_003119_040 Hb_003878_060 Hb_003878_060 Hb_008864_100--Hb_003878_060 Hb_000236_480 Hb_000236_480 Hb_008864_100--Hb_000236_480 Hb_000260_610 Hb_000260_610 Hb_008864_100--Hb_000260_610 Hb_006775_070 Hb_006775_070 Hb_005276_030--Hb_006775_070 Hb_008250_020 Hb_008250_020 Hb_005276_030--Hb_008250_020 Hb_173029_030 Hb_173029_030 Hb_005276_030--Hb_173029_030 Hb_000069_300 Hb_000069_300 Hb_005276_030--Hb_000069_300 Hb_000197_170 Hb_000197_170 Hb_005276_030--Hb_000197_170 Hb_001536_020 Hb_001536_020 Hb_005276_030--Hb_001536_020 Hb_001762_050 Hb_001762_050 Hb_003861_030--Hb_001762_050 Hb_183719_010 Hb_183719_010 Hb_003861_030--Hb_183719_010 Hb_002701_230 Hb_002701_230 Hb_003861_030--Hb_002701_230 Hb_000367_240 Hb_000367_240 Hb_003861_030--Hb_000367_240 Hb_011360_130 Hb_011360_130 Hb_003861_030--Hb_011360_130 Hb_001279_050 Hb_001279_050 Hb_003861_030--Hb_001279_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0928277 0.0312932 0.262227 0.228284 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.10097 0 0

CAGE analysis