Hb_001818_030

Information

Type -
Description -
Location Contig1818: 11436-14965
Sequence    

Annotation

kegg
ID rcu:RCOM_1633300
description hypothetical protein
nr
ID KDP29625.1
description hypothetical protein JCGZ_18787 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KBJ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18787 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001818_030 0.0 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
2 Hb_002999_040 0.032649597 - - conserved hypothetical protein [Ricinus communis]
3 Hb_003581_180 0.2257326384 - - Pectate lyase precursor, putative [Ricinus communis]
4 Hb_000856_160 0.2825332594 - - -
5 Hb_000925_040 0.2955775428 - - kinase, putative [Ricinus communis]
6 Hb_152362_010 0.3055262104 - - Gamma-glutamyl-gamma-aminobutyrate hydrolase, putative [Ricinus communis]
7 Hb_015475_010 0.3094835134 - - hypothetical protein VITISV_034342 [Vitis vinifera]
8 Hb_002685_050 0.3097574766 transcription factor TF Family: LUG PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
9 Hb_000599_320 0.3179125099 - - hypothetical protein JCGZ_17662 [Jatropha curcas]
10 Hb_000010_450 0.3343403177 - - purine permease, putative [Ricinus communis]
11 Hb_003659_020 0.3352205962 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
12 Hb_008035_050 0.3379069611 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
13 Hb_000125_220 0.3431276341 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 13 [Jatropha curcas]
14 Hb_139691_010 0.3432466754 - - -
15 Hb_000025_170 0.3439453538 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004228_060 0.3464614668 - - Tubulin beta-2 chain [Triticum urartu]
17 Hb_014068_020 0.3607026972 - - PREDICTED: uncharacterized protein LOC105628343 [Jatropha curcas]
18 Hb_002097_220 0.3704863296 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Sesamum indicum]
19 Hb_000392_290 0.3723219295 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
20 Hb_003164_010 0.3723442703 - - ankyrin repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001818_030 Hb_001818_030 Hb_002999_040 Hb_002999_040 Hb_001818_030--Hb_002999_040 Hb_003581_180 Hb_003581_180 Hb_001818_030--Hb_003581_180 Hb_000856_160 Hb_000856_160 Hb_001818_030--Hb_000856_160 Hb_000925_040 Hb_000925_040 Hb_001818_030--Hb_000925_040 Hb_152362_010 Hb_152362_010 Hb_001818_030--Hb_152362_010 Hb_015475_010 Hb_015475_010 Hb_001818_030--Hb_015475_010 Hb_002999_040--Hb_003581_180 Hb_002999_040--Hb_000856_160 Hb_002999_040--Hb_152362_010 Hb_002999_040--Hb_000925_040 Hb_003659_020 Hb_003659_020 Hb_002999_040--Hb_003659_020 Hb_000025_170 Hb_000025_170 Hb_003581_180--Hb_000025_170 Hb_002301_090 Hb_002301_090 Hb_003581_180--Hb_002301_090 Hb_000179_260 Hb_000179_260 Hb_003581_180--Hb_000179_260 Hb_004228_060 Hb_004228_060 Hb_003581_180--Hb_004228_060 Hb_000856_160--Hb_003659_020 Hb_008035_050 Hb_008035_050 Hb_000856_160--Hb_008035_050 Hb_139691_010 Hb_139691_010 Hb_000856_160--Hb_139691_010 Hb_000392_290 Hb_000392_290 Hb_000856_160--Hb_000392_290 Hb_001789_170 Hb_001789_170 Hb_000856_160--Hb_001789_170 Hb_012092_100 Hb_012092_100 Hb_000925_040--Hb_012092_100 Hb_000010_300 Hb_000010_300 Hb_000925_040--Hb_000010_300 Hb_000925_040--Hb_015475_010 Hb_002631_190 Hb_002631_190 Hb_000925_040--Hb_002631_190 Hb_000320_260 Hb_000320_260 Hb_000925_040--Hb_000320_260 Hb_000302_210 Hb_000302_210 Hb_000925_040--Hb_000302_210 Hb_000264_220 Hb_000264_220 Hb_152362_010--Hb_000264_220 Hb_006907_090 Hb_006907_090 Hb_152362_010--Hb_006907_090 Hb_000440_030 Hb_000440_030 Hb_152362_010--Hb_000440_030 Hb_002498_130 Hb_002498_130 Hb_152362_010--Hb_002498_130 Hb_000781_050 Hb_000781_050 Hb_152362_010--Hb_000781_050 Hb_015475_010--Hb_006907_090 Hb_015475_010--Hb_002631_190 Hb_015475_010--Hb_002999_040 Hb_008864_020 Hb_008864_020 Hb_015475_010--Hb_008864_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.203237 0.0637907 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.164466 0 0

CAGE analysis