Hb_000925_040

Information

Type -
Description -
Location Contig925: 19326-26322
Sequence    

Annotation

kegg
ID rcu:RCOM_0419700
description kinase, putative (EC:2.7.11.30)
nr
ID XP_002524064.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9LXA5
description L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1
trembl
ID B9SDJ5
description Kinase, putative OS=Ricinus communis GN=RCOM_0419700 PE=3 SV=1
Gene Ontology
ID GO:0000166
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000925_040 0.0 - - kinase, putative [Ricinus communis]
2 Hb_012092_100 0.2217272303 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000010_300 0.2320394317 transcription factor TF Family: TAZ protein binding protein, putative [Ricinus communis]
4 Hb_015475_010 0.2338980636 - - hypothetical protein VITISV_034342 [Vitis vinifera]
5 Hb_002631_190 0.2427038101 transcription factor TF Family: GRAS DELLA protein GAI1, putative [Ricinus communis]
6 Hb_000320_260 0.2788069484 - - unnamed protein product [Vitis vinifera]
7 Hb_000302_210 0.278819346 - - conserved hypothetical protein [Ricinus communis]
8 Hb_007904_250 0.2834303901 - - PREDICTED: vignain-like [Jatropha curcas]
9 Hb_006472_070 0.2850389696 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
10 Hb_008864_100 0.2944303583 - - PREDICTED: uncharacterized protein LOC105631832 isoform X1 [Jatropha curcas]
11 Hb_001818_030 0.2955775428 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
12 Hb_002999_040 0.2995129385 - - conserved hypothetical protein [Ricinus communis]
13 Hb_044653_080 0.3012860789 - - Uncharacterized protein TCM_045144 [Theobroma cacao]
14 Hb_003581_180 0.3023510229 - - Pectate lyase precursor, putative [Ricinus communis]
15 Hb_000125_220 0.3030810111 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 13 [Jatropha curcas]
16 Hb_002301_090 0.3032477533 - - PREDICTED: dnaJ protein homolog 1-like [Jatropha curcas]
17 Hb_098785_010 0.3039962153 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
18 Hb_000544_160 0.3066975554 - - PREDICTED: phosphomethylethanolamine N-methyltransferase-like [Nelumbo nucifera]
19 Hb_007943_060 0.3095462242 - - Rop5 [Hevea brasiliensis]
20 Hb_014068_020 0.3106381153 - - PREDICTED: uncharacterized protein LOC105628343 [Jatropha curcas]

Gene co-expression network

sample Hb_000925_040 Hb_000925_040 Hb_012092_100 Hb_012092_100 Hb_000925_040--Hb_012092_100 Hb_000010_300 Hb_000010_300 Hb_000925_040--Hb_000010_300 Hb_015475_010 Hb_015475_010 Hb_000925_040--Hb_015475_010 Hb_002631_190 Hb_002631_190 Hb_000925_040--Hb_002631_190 Hb_000320_260 Hb_000320_260 Hb_000925_040--Hb_000320_260 Hb_000302_210 Hb_000302_210 Hb_000925_040--Hb_000302_210 Hb_008864_100 Hb_008864_100 Hb_012092_100--Hb_008864_100 Hb_012092_100--Hb_002631_190 Hb_012092_100--Hb_000010_300 Hb_006472_070 Hb_006472_070 Hb_012092_100--Hb_006472_070 Hb_006289_020 Hb_006289_020 Hb_012092_100--Hb_006289_020 Hb_000010_300--Hb_000320_260 Hb_009571_010 Hb_009571_010 Hb_000010_300--Hb_009571_010 Hb_004452_090 Hb_004452_090 Hb_000010_300--Hb_004452_090 Hb_000086_670 Hb_000086_670 Hb_000010_300--Hb_000086_670 Hb_000010_300--Hb_006472_070 Hb_000010_300--Hb_006289_020 Hb_006907_090 Hb_006907_090 Hb_015475_010--Hb_006907_090 Hb_001818_030 Hb_001818_030 Hb_015475_010--Hb_001818_030 Hb_015475_010--Hb_002631_190 Hb_002999_040 Hb_002999_040 Hb_015475_010--Hb_002999_040 Hb_008864_020 Hb_008864_020 Hb_015475_010--Hb_008864_020 Hb_002631_190--Hb_008864_100 Hb_002631_190--Hb_000010_300 Hb_001493_160 Hb_001493_160 Hb_002631_190--Hb_001493_160 Hb_002301_090 Hb_002301_090 Hb_002631_190--Hb_002301_090 Hb_009541_010 Hb_009541_010 Hb_000320_260--Hb_009541_010 Hb_002662_040 Hb_002662_040 Hb_000320_260--Hb_002662_040 Hb_000526_010 Hb_000526_010 Hb_000320_260--Hb_000526_010 Hb_004163_030 Hb_004163_030 Hb_000320_260--Hb_004163_030 Hb_105328_010 Hb_105328_010 Hb_000320_260--Hb_105328_010 Hb_000985_070 Hb_000985_070 Hb_000302_210--Hb_000985_070 Hb_012754_020 Hb_012754_020 Hb_000302_210--Hb_012754_020 Hb_098785_010 Hb_098785_010 Hb_000302_210--Hb_098785_010 Hb_000125_220 Hb_000125_220 Hb_000302_210--Hb_000125_220 Hb_003799_020 Hb_003799_020 Hb_000302_210--Hb_003799_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.210769 0.548855 2.54505 1.28665 0.0205146 0.10845
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0116124 0.00913849 2.26219 0.213615 0

CAGE analysis