Hb_000125_220

Information

Type -
Description -
Location Contig125: 284122-288431
Sequence    

Annotation

kegg
ID tcc:TCM_020002
description Calcium-dependent phosphotriesterase superfamily protein
nr
ID XP_012065204.1
description PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 13 [Jatropha curcas]
swissprot
ID Q9M1B4
description Protein STRICTOSIDINE SYNTHASE-LIKE 13 OS=Arabidopsis thaliana GN=SSL13 PE=1 SV=1
trembl
ID A0A067L643
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20892 PE=4 SV=1
Gene Ontology
ID GO:0016844
description strictosidine synthase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000125_220 0.0 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 13 [Jatropha curcas]
2 Hb_000085_390 0.1699787265 - - unnamed protein product [Vitis vinifera]
3 Hb_000985_070 0.203518257 - - PREDICTED: uncharacterized protein LOC105647984 [Jatropha curcas]
4 Hb_098785_010 0.2039097356 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
5 Hb_000302_210 0.2230965989 - - conserved hypothetical protein [Ricinus communis]
6 Hb_012754_020 0.2458548563 - - PREDICTED: uncharacterized protein LOC104229837 [Nicotiana sylvestris]
7 Hb_012092_100 0.2741379905 - - conserved hypothetical protein [Ricinus communis]
8 Hb_014068_020 0.2876182318 - - PREDICTED: uncharacterized protein LOC105628343 [Jatropha curcas]
9 Hb_000010_300 0.2952410277 transcription factor TF Family: TAZ protein binding protein, putative [Ricinus communis]
10 Hb_002475_080 0.2975906783 transcription factor TF Family: PHD PREDICTED: PHD finger protein MALE MEIOCYTE DEATH 1 [Jatropha curcas]
11 Hb_000925_040 0.3030810111 - - kinase, putative [Ricinus communis]
12 Hb_006472_070 0.3080242618 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
13 Hb_000086_670 0.3142615626 - - PREDICTED: probable DNA helicase MCM9 [Jatropha curcas]
14 Hb_001493_160 0.3172308633 - - PREDICTED: uncharacterized protein LOC105631327 [Jatropha curcas]
15 Hb_164162_010 0.3209803058 - - PREDICTED: uncharacterized protein At1g08160-like [Jatropha curcas]
16 Hb_006472_080 0.3256653319 - - -
17 Hb_001221_280 0.3294489649 - - -
18 Hb_007632_180 0.3297115026 - - Pectate lyase precursor, putative [Ricinus communis]
19 Hb_007904_250 0.3317607963 - - PREDICTED: vignain-like [Jatropha curcas]
20 Hb_001890_020 0.3374019484 - - hypothetical protein CICLE_v10025198mg [Citrus clementina]

Gene co-expression network

sample Hb_000125_220 Hb_000125_220 Hb_000085_390 Hb_000085_390 Hb_000125_220--Hb_000085_390 Hb_000985_070 Hb_000985_070 Hb_000125_220--Hb_000985_070 Hb_098785_010 Hb_098785_010 Hb_000125_220--Hb_098785_010 Hb_000302_210 Hb_000302_210 Hb_000125_220--Hb_000302_210 Hb_012754_020 Hb_012754_020 Hb_000125_220--Hb_012754_020 Hb_012092_100 Hb_012092_100 Hb_000125_220--Hb_012092_100 Hb_000085_390--Hb_098785_010 Hb_000094_240 Hb_000094_240 Hb_000085_390--Hb_000094_240 Hb_000086_670 Hb_000086_670 Hb_000085_390--Hb_000086_670 Hb_000085_390--Hb_000302_210 Hb_000085_390--Hb_012754_020 Hb_164162_010 Hb_164162_010 Hb_000985_070--Hb_164162_010 Hb_000985_070--Hb_012754_020 Hb_000985_070--Hb_000302_210 Hb_014068_020 Hb_014068_020 Hb_000985_070--Hb_014068_020 Hb_000985_070--Hb_098785_010 Hb_098785_010--Hb_000302_210 Hb_006569_070 Hb_006569_070 Hb_098785_010--Hb_006569_070 Hb_003799_020 Hb_003799_020 Hb_098785_010--Hb_003799_020 Hb_001221_280 Hb_001221_280 Hb_098785_010--Hb_001221_280 Hb_000302_210--Hb_012754_020 Hb_000302_210--Hb_003799_020 Hb_000925_040 Hb_000925_040 Hb_000302_210--Hb_000925_040 Hb_003185_090 Hb_003185_090 Hb_012754_020--Hb_003185_090 Hb_001493_160 Hb_001493_160 Hb_012754_020--Hb_001493_160 Hb_012754_020--Hb_164162_010 Hb_008864_100 Hb_008864_100 Hb_012092_100--Hb_008864_100 Hb_012092_100--Hb_000925_040 Hb_002631_190 Hb_002631_190 Hb_012092_100--Hb_002631_190 Hb_000010_300 Hb_000010_300 Hb_012092_100--Hb_000010_300 Hb_006472_070 Hb_006472_070 Hb_012092_100--Hb_006472_070 Hb_006289_020 Hb_006289_020 Hb_012092_100--Hb_006289_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0149207 0.229236 0.0444613 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.1006 0.0751211 0

CAGE analysis