Hb_164162_010

Information

Type -
Description -
Location Contig164162: 4879-5589
Sequence    

Annotation

kegg
ID rcu:RCOM_1175710
description hypothetical protein
nr
ID XP_012088315.1
description PREDICTED: uncharacterized protein At1g08160-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JXA6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25816 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_164162_010 0.0 - - PREDICTED: uncharacterized protein At1g08160-like [Jatropha curcas]
2 Hb_000985_070 0.1570343892 - - PREDICTED: uncharacterized protein LOC105647984 [Jatropha curcas]
3 Hb_012754_020 0.2195531145 - - PREDICTED: uncharacterized protein LOC104229837 [Nicotiana sylvestris]
4 Hb_002045_260 0.2332056706 - - calmodulin, putative [Ricinus communis]
5 Hb_006478_140 0.2352330201 - - PREDICTED: vicilin-like antimicrobial peptides 2-2 [Jatropha curcas]
6 Hb_003751_100 0.2367592367 - - Amino acid permease 2 [Glycine soja]
7 Hb_002374_360 0.2368932145 - - hypothetical protein POPTR_0002s08300g [Populus trichocarpa]
8 Hb_000862_060 0.2401448664 - - conserved hypothetical protein [Ricinus communis]
9 Hb_011622_010 0.2407418494 - - PREDICTED: transcription factor DIVARICATA-like [Jatropha curcas]
10 Hb_001016_140 0.2449656781 - - PREDICTED: uncharacterized protein LOC105647117 [Jatropha curcas]
11 Hb_001699_120 0.247563291 - - Protein P21, putative [Ricinus communis]
12 Hb_000604_080 0.2476048336 - - Fgenesh protein [Medicago truncatula]
13 Hb_014068_020 0.2554595378 - - PREDICTED: uncharacterized protein LOC105628343 [Jatropha curcas]
14 Hb_005375_060 0.2555613111 - - PREDICTED: probably inactive receptor-like protein kinase At2g46850 [Jatropha curcas]
15 Hb_002157_100 0.2616404304 - - -
16 Hb_005433_030 0.2649818633 transcription factor TF Family: MYB unnamed protein product [Vitis vinifera]
17 Hb_042098_010 0.2711356175 - - 12-oxophytodienoate reductase 2 [Theobroma cacao]
18 Hb_002477_100 0.2734478224 - - PREDICTED: protein Brevis radix-like 2 [Jatropha curcas]
19 Hb_002973_070 0.2744144604 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 40 [Jatropha curcas]
20 Hb_008948_070 0.2745853297 - - PREDICTED: phospholipase D alpha 1-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_164162_010 Hb_164162_010 Hb_000985_070 Hb_000985_070 Hb_164162_010--Hb_000985_070 Hb_012754_020 Hb_012754_020 Hb_164162_010--Hb_012754_020 Hb_002045_260 Hb_002045_260 Hb_164162_010--Hb_002045_260 Hb_006478_140 Hb_006478_140 Hb_164162_010--Hb_006478_140 Hb_003751_100 Hb_003751_100 Hb_164162_010--Hb_003751_100 Hb_002374_360 Hb_002374_360 Hb_164162_010--Hb_002374_360 Hb_000985_070--Hb_012754_020 Hb_000302_210 Hb_000302_210 Hb_000985_070--Hb_000302_210 Hb_000125_220 Hb_000125_220 Hb_000985_070--Hb_000125_220 Hb_014068_020 Hb_014068_020 Hb_000985_070--Hb_014068_020 Hb_098785_010 Hb_098785_010 Hb_000985_070--Hb_098785_010 Hb_003185_090 Hb_003185_090 Hb_012754_020--Hb_003185_090 Hb_012754_020--Hb_000302_210 Hb_001493_160 Hb_001493_160 Hb_012754_020--Hb_001493_160 Hb_012754_020--Hb_000125_220 Hb_002157_100 Hb_002157_100 Hb_002045_260--Hb_002157_100 Hb_006262_030 Hb_006262_030 Hb_002045_260--Hb_006262_030 Hb_042098_010 Hb_042098_010 Hb_002045_260--Hb_042098_010 Hb_000656_120 Hb_000656_120 Hb_002045_260--Hb_000656_120 Hb_002045_260--Hb_002374_360 Hb_007017_110 Hb_007017_110 Hb_002045_260--Hb_007017_110 Hb_000604_080 Hb_000604_080 Hb_006478_140--Hb_000604_080 Hb_008948_070 Hb_008948_070 Hb_006478_140--Hb_008948_070 Hb_001846_030 Hb_001846_030 Hb_006478_140--Hb_001846_030 Hb_000953_180 Hb_000953_180 Hb_006478_140--Hb_000953_180 Hb_127372_010 Hb_127372_010 Hb_006478_140--Hb_127372_010 Hb_011622_010 Hb_011622_010 Hb_006478_140--Hb_011622_010 Hb_007163_080 Hb_007163_080 Hb_003751_100--Hb_007163_080 Hb_005375_060 Hb_005375_060 Hb_003751_100--Hb_005375_060 Hb_003751_050 Hb_003751_050 Hb_003751_100--Hb_003751_050 Hb_003751_100--Hb_002045_260 Hb_003751_100--Hb_011622_010 Hb_003751_100--Hb_002374_360 Hb_000862_060 Hb_000862_060 Hb_002374_360--Hb_000862_060 Hb_002374_360--Hb_003751_050 Hb_002374_360--Hb_002157_100 Hb_005433_030 Hb_005433_030 Hb_002374_360--Hb_005433_030 Hb_008080_030 Hb_008080_030 Hb_002374_360--Hb_008080_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.330202 0.553977 0.0672137 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.111258 0.151848 0

CAGE analysis