Hb_001221_280

Information

Type -
Description -
Location Contig1221: 212663-212935
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0003824
description pyridoxal phosphate-dependent transferases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001221_280 0.0 - - -
2 Hb_043623_020 0.1534331645 - - hypothetical protein JCGZ_17692 [Jatropha curcas]
3 Hb_001143_260 0.2072438986 - - PREDICTED: metal transporter Nramp5-like [Populus euphratica]
4 Hb_003799_020 0.2538374908 - - hypothetical protein VITISV_003261 [Vitis vinifera]
5 Hb_098785_010 0.2719199019 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
6 Hb_006569_070 0.2818275138 - - nucleic acid binding protein, putative [Ricinus communis]
7 Hb_000856_160 0.3035896599 - - -
8 Hb_010515_030 0.304724838 - - PREDICTED: G2/mitotic-specific cyclin S13-7 [Jatropha curcas]
9 Hb_003659_020 0.3082386187 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
10 Hb_008035_050 0.3095624747 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
11 Hb_139691_010 0.3123283399 - - -
12 Hb_001008_140 0.3168883777 - - -
13 Hb_000302_210 0.3202725749 - - conserved hypothetical protein [Ricinus communis]
14 Hb_135008_010 0.322141989 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
15 Hb_000125_220 0.3294489649 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 13 [Jatropha curcas]
16 Hb_000392_290 0.3298998018 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
17 Hb_000876_040 0.3327001726 - - PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Jatropha curcas]
18 Hb_000085_390 0.3372105421 - - unnamed protein product [Vitis vinifera]
19 Hb_001342_050 0.3463859991 - - -
20 Hb_001789_170 0.3497725412 - - hypothetical protein JCGZ_08269 [Jatropha curcas]

Gene co-expression network

sample Hb_001221_280 Hb_001221_280 Hb_043623_020 Hb_043623_020 Hb_001221_280--Hb_043623_020 Hb_001143_260 Hb_001143_260 Hb_001221_280--Hb_001143_260 Hb_003799_020 Hb_003799_020 Hb_001221_280--Hb_003799_020 Hb_098785_010 Hb_098785_010 Hb_001221_280--Hb_098785_010 Hb_006569_070 Hb_006569_070 Hb_001221_280--Hb_006569_070 Hb_000856_160 Hb_000856_160 Hb_001221_280--Hb_000856_160 Hb_043623_020--Hb_001143_260 Hb_000876_040 Hb_000876_040 Hb_043623_020--Hb_000876_040 Hb_002513_050 Hb_002513_050 Hb_043623_020--Hb_002513_050 Hb_009615_080 Hb_009615_080 Hb_043623_020--Hb_009615_080 Hb_000184_200 Hb_000184_200 Hb_043623_020--Hb_000184_200 Hb_001143_260--Hb_002513_050 Hb_001143_260--Hb_000876_040 Hb_001143_260--Hb_000184_200 Hb_001143_260--Hb_009615_080 Hb_003747_110 Hb_003747_110 Hb_003799_020--Hb_003747_110 Hb_000302_210 Hb_000302_210 Hb_003799_020--Hb_000302_210 Hb_001008_140 Hb_001008_140 Hb_003799_020--Hb_001008_140 Hb_003799_020--Hb_098785_010 Hb_006788_080 Hb_006788_080 Hb_003799_020--Hb_006788_080 Hb_000125_220 Hb_000125_220 Hb_098785_010--Hb_000125_220 Hb_098785_010--Hb_000302_210 Hb_098785_010--Hb_006569_070 Hb_000985_070 Hb_000985_070 Hb_098785_010--Hb_000985_070 Hb_000011_090 Hb_000011_090 Hb_006569_070--Hb_000011_090 Hb_007012_070 Hb_007012_070 Hb_006569_070--Hb_007012_070 Hb_003581_190 Hb_003581_190 Hb_006569_070--Hb_003581_190 Hb_010515_030 Hb_010515_030 Hb_006569_070--Hb_010515_030 Hb_003659_020 Hb_003659_020 Hb_000856_160--Hb_003659_020 Hb_008035_050 Hb_008035_050 Hb_000856_160--Hb_008035_050 Hb_139691_010 Hb_139691_010 Hb_000856_160--Hb_139691_010 Hb_000392_290 Hb_000392_290 Hb_000856_160--Hb_000392_290 Hb_001789_170 Hb_001789_170 Hb_000856_160--Hb_001789_170 Hb_002999_040 Hb_002999_040 Hb_000856_160--Hb_002999_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.380999 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.512442 0.177541 0

CAGE analysis