Hb_002701_230

Information

Type -
Description -
Location Contig2701: 207778-209193
Sequence    

Annotation

kegg
ID pmum:103330263
description uncharacterized LOC103330263
nr
ID XP_012088159.1
description PREDICTED: uncharacterized protein LOC105646833 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID M5WWY6
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015454mg PE=4 SV=1
Gene Ontology
ID GO:0008168
description s-adenosyl-l-methionine-dependent methyltransferases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002701_230 0.0 - - PREDICTED: uncharacterized protein LOC105646833 [Jatropha curcas]
2 Hb_000020_040 0.1787044527 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
3 Hb_000020_080 0.1909625458 transcription factor TF Family: MYB hypothetical protein JCGZ_09080 [Jatropha curcas]
4 Hb_002232_310 0.2058453653 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
5 Hb_000230_190 0.2072789214 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1 [Jatropha curcas]
6 Hb_001755_040 0.2074700271 - - PREDICTED: cyclin-A2-4-like isoform X1 [Jatropha curcas]
7 Hb_012753_150 0.209836667 transcription factor TF Family: GRAS DELLA protein RGL1, putative [Ricinus communis]
8 Hb_031266_030 0.2106261461 - - Kinase superfamily protein isoform 1 [Theobroma cacao]
9 Hb_010288_030 0.210814376 - - PREDICTED: uncharacterized protein LOC105642607 [Jatropha curcas]
10 Hb_014497_070 0.2113973726 - - PREDICTED: cyclin-dependent kinase B2-2 [Jatropha curcas]
11 Hb_011360_130 0.2120670121 - - conserved hypothetical protein [Ricinus communis]
12 Hb_011457_120 0.2157452378 - - PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
13 Hb_003109_010 0.2163934996 - - PREDICTED: kinesin-like protein KIN12B [Jatropha curcas]
14 Hb_004163_030 0.217097925 - - PREDICTED: protein PHLOEM PROTEIN 2-LIKE A10 [Jatropha curcas]
15 Hb_003935_090 0.2172102247 - - PREDICTED: uncharacterized protein At4g38062 [Jatropha curcas]
16 Hb_006289_020 0.2183694782 - - PREDICTED: shugoshin-1 isoform X1 [Jatropha curcas]
17 Hb_004223_170 0.2203426827 - - PREDICTED: ATP sulfurylase 2 [Jatropha curcas]
18 Hb_011033_010 0.2217429108 - - ATP-binding cassette transporter, putative [Ricinus communis]
19 Hb_001478_020 0.2227025008 desease resistance Gene Name: AAA thyroid hormone receptor interactor, putative [Ricinus communis]
20 Hb_004093_030 0.2242444141 - - hypothetical protein RCOM_1406750 [Ricinus communis]

Gene co-expression network

sample Hb_002701_230 Hb_002701_230 Hb_000020_040 Hb_000020_040 Hb_002701_230--Hb_000020_040 Hb_000020_080 Hb_000020_080 Hb_002701_230--Hb_000020_080 Hb_002232_310 Hb_002232_310 Hb_002701_230--Hb_002232_310 Hb_000230_190 Hb_000230_190 Hb_002701_230--Hb_000230_190 Hb_001755_040 Hb_001755_040 Hb_002701_230--Hb_001755_040 Hb_012753_150 Hb_012753_150 Hb_002701_230--Hb_012753_150 Hb_004079_090 Hb_004079_090 Hb_000020_040--Hb_004079_090 Hb_011457_120 Hb_011457_120 Hb_000020_040--Hb_011457_120 Hb_000020_040--Hb_001755_040 Hb_000020_040--Hb_002232_310 Hb_011360_130 Hb_011360_130 Hb_000020_040--Hb_011360_130 Hb_014497_070 Hb_014497_070 Hb_000020_040--Hb_014497_070 Hb_000020_080--Hb_012753_150 Hb_107078_010 Hb_107078_010 Hb_000020_080--Hb_107078_010 Hb_000388_040 Hb_000388_040 Hb_000020_080--Hb_000388_040 Hb_006060_010 Hb_006060_010 Hb_000020_080--Hb_006060_010 Hb_004218_050 Hb_004218_050 Hb_000020_080--Hb_004218_050 Hb_007545_110 Hb_007545_110 Hb_000020_080--Hb_007545_110 Hb_002232_310--Hb_001755_040 Hb_003935_090 Hb_003935_090 Hb_002232_310--Hb_003935_090 Hb_010705_040 Hb_010705_040 Hb_002232_310--Hb_010705_040 Hb_003109_010 Hb_003109_010 Hb_002232_310--Hb_003109_010 Hb_004109_100 Hb_004109_100 Hb_002232_310--Hb_004109_100 Hb_007574_020 Hb_007574_020 Hb_002232_310--Hb_007574_020 Hb_006133_020 Hb_006133_020 Hb_000230_190--Hb_006133_020 Hb_001141_050 Hb_001141_050 Hb_000230_190--Hb_001141_050 Hb_003020_190 Hb_003020_190 Hb_000230_190--Hb_003020_190 Hb_001377_530 Hb_001377_530 Hb_000230_190--Hb_001377_530 Hb_000958_120 Hb_000958_120 Hb_000230_190--Hb_000958_120 Hb_000069_300 Hb_000069_300 Hb_000230_190--Hb_000069_300 Hb_001755_040--Hb_004109_100 Hb_000936_030 Hb_000936_030 Hb_001755_040--Hb_000936_030 Hb_001755_040--Hb_007574_020 Hb_001755_040--Hb_003935_090 Hb_001755_040--Hb_010705_040 Hb_001761_010 Hb_001761_010 Hb_012753_150--Hb_001761_010 Hb_012753_150--Hb_006060_010 Hb_012753_150--Hb_000388_040 Hb_005568_140 Hb_005568_140 Hb_012753_150--Hb_005568_140 Hb_012753_150--Hb_004109_100 Hb_010267_020 Hb_010267_020 Hb_012753_150--Hb_010267_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0878653 0.0947536 1.20367 0.396675 0 0.038544
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.147678 0.0419638 0.164406

CAGE analysis