Hb_001769_090

Information

Type -
Description -
Location Contig1769: 61393-62010
Sequence    

Annotation

kegg
ID rcu:RCOM_1587340
description hypothetical protein
nr
ID XP_012068214.1
description PREDICTED: uncharacterized protein LOC105630842 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LBY4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16021 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001769_090 0.0 - - PREDICTED: uncharacterized protein LOC105630842 [Jatropha curcas]
2 Hb_011671_380 0.1037899634 - - Blue copper protein precursor, putative [Ricinus communis]
3 Hb_045992_010 0.1240683916 - - -
4 Hb_027402_120 0.1386833458 - - zinc finger protein, putative [Ricinus communis]
5 Hb_001218_020 0.1413074969 transcription factor TF Family: MYB hypothetical protein POPTR_0005s17080g [Populus trichocarpa]
6 Hb_002999_090 0.1463829548 - - conserved hypothetical protein [Ricinus communis]
7 Hb_139460_010 0.1489636805 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
8 Hb_000301_030 0.1497356696 - - PREDICTED: pectate lyase-like [Jatropha curcas]
9 Hb_145535_010 0.1504029567 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
10 Hb_003855_070 0.1520917347 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
11 Hb_011856_010 0.1524029283 - - cytochrome P450, putative [Ricinus communis]
12 Hb_001901_010 0.1524255914 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
13 Hb_107258_010 0.1541343639 - - hypothetical protein JCGZ_01141 [Jatropha curcas]
14 Hb_001863_290 0.1544389238 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
15 Hb_002615_050 0.1547472358 - - ATP-binding cassette transporter, putative [Ricinus communis]
16 Hb_004564_010 0.1562989925 - - receptor-kinase, putative [Ricinus communis]
17 Hb_002758_040 0.1569581124 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_000120_710 0.1571494242 - - unnamed protein product [Vitis vinifera]
19 Hb_002534_080 0.1587638903 - - zinc finger protein, putative [Ricinus communis]
20 Hb_011824_010 0.1590351546 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_001769_090 Hb_001769_090 Hb_011671_380 Hb_011671_380 Hb_001769_090--Hb_011671_380 Hb_045992_010 Hb_045992_010 Hb_001769_090--Hb_045992_010 Hb_027402_120 Hb_027402_120 Hb_001769_090--Hb_027402_120 Hb_001218_020 Hb_001218_020 Hb_001769_090--Hb_001218_020 Hb_002999_090 Hb_002999_090 Hb_001769_090--Hb_002999_090 Hb_139460_010 Hb_139460_010 Hb_001769_090--Hb_139460_010 Hb_011671_380--Hb_027402_120 Hb_002615_050 Hb_002615_050 Hb_011671_380--Hb_002615_050 Hb_007810_140 Hb_007810_140 Hb_011671_380--Hb_007810_140 Hb_011671_380--Hb_139460_010 Hb_001863_290 Hb_001863_290 Hb_011671_380--Hb_001863_290 Hb_001901_010 Hb_001901_010 Hb_045992_010--Hb_001901_010 Hb_000005_270 Hb_000005_270 Hb_045992_010--Hb_000005_270 Hb_045992_010--Hb_001218_020 Hb_006153_200 Hb_006153_200 Hb_045992_010--Hb_006153_200 Hb_000120_440 Hb_000120_440 Hb_045992_010--Hb_000120_440 Hb_045992_010--Hb_002999_090 Hb_002534_080 Hb_002534_080 Hb_027402_120--Hb_002534_080 Hb_004564_010 Hb_004564_010 Hb_027402_120--Hb_004564_010 Hb_027402_120--Hb_002615_050 Hb_028013_010 Hb_028013_010 Hb_027402_120--Hb_028013_010 Hb_000488_040 Hb_000488_040 Hb_027402_120--Hb_000488_040 Hb_002758_040 Hb_002758_040 Hb_027402_120--Hb_002758_040 Hb_000120_710 Hb_000120_710 Hb_001218_020--Hb_000120_710 Hb_003855_070 Hb_003855_070 Hb_001218_020--Hb_003855_070 Hb_001328_110 Hb_001328_110 Hb_001218_020--Hb_001328_110 Hb_006538_050 Hb_006538_050 Hb_001218_020--Hb_006538_050 Hb_000003_470 Hb_000003_470 Hb_001218_020--Hb_000003_470 Hb_003462_150 Hb_003462_150 Hb_002999_090--Hb_003462_150 Hb_002556_020 Hb_002556_020 Hb_002999_090--Hb_002556_020 Hb_004544_080 Hb_004544_080 Hb_002999_090--Hb_004544_080 Hb_000141_230 Hb_000141_230 Hb_002999_090--Hb_000141_230 Hb_002999_090--Hb_001901_010 Hb_002475_020 Hb_002475_020 Hb_002999_090--Hb_002475_020 Hb_011856_010 Hb_011856_010 Hb_139460_010--Hb_011856_010 Hb_011824_010 Hb_011824_010 Hb_139460_010--Hb_011824_010 Hb_139460_010--Hb_002615_050 Hb_001173_050 Hb_001173_050 Hb_139460_010--Hb_001173_050 Hb_000160_230 Hb_000160_230 Hb_139460_010--Hb_000160_230 Hb_139460_010--Hb_007810_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.850436 0 0.599315 0 0.120549
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0966608 0 0 7.12244 0

CAGE analysis