Hb_001901_010

Information

Type -
Description -
Location Contig1901: 1975-3728
Sequence    

Annotation

kegg
ID rcu:RCOM_0544250
description carbonic anhydrase, putative (EC:4.2.1.1)
nr
ID XP_012065108.1
description PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
swissprot
ID Q8L817
description Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana GN=ACA7 PE=2 SV=1
trembl
ID A0A067LIF8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05491 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001901_010 0.0 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
2 Hb_002999_090 0.0623825957 - - conserved hypothetical protein [Ricinus communis]
3 Hb_164162_020 0.071457358 - - PREDICTED: uncharacterized protein LOC105646964 [Jatropha curcas]
4 Hb_001971_070 0.0752390445 - - unnamed protein product [Coffea canephora]
5 Hb_006153_200 0.0757390202 - - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Theobroma cacao]
6 Hb_003462_150 0.0818616523 - - PREDICTED: chitinase 1-like [Eucalyptus grandis]
7 Hb_004544_080 0.0823220589 - - lectin protein kinase [Populus trichocarpa]
8 Hb_045992_010 0.0848521263 - - -
9 Hb_006538_070 0.0897996481 - - hypothetical protein JCGZ_18339 [Jatropha curcas]
10 Hb_002475_020 0.0966960451 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Populus euphratica]
11 Hb_000141_230 0.0967118396 - - PREDICTED: 14 kDa proline-rich protein DC2.15-like [Camelina sativa]
12 Hb_000948_070 0.0995182143 - - hypothetical protein POPTR_0016s01720g [Populus trichocarpa]
13 Hb_001218_020 0.1007590311 transcription factor TF Family: MYB hypothetical protein POPTR_0005s17080g [Populus trichocarpa]
14 Hb_002556_020 0.1080137934 - - hypothetical protein JCGZ_12588 [Jatropha curcas]
15 Hb_000005_270 0.1141043078 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
16 Hb_031340_030 0.1149031594 - - PREDICTED: L-type lectin-domain containing receptor kinase IV.1 [Jatropha curcas]
17 Hb_000608_080 0.1184789867 - - hypothetical protein JCGZ_22216 [Jatropha curcas]
18 Hb_001195_440 0.1221677694 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
19 Hb_000521_340 0.1248387429 - - PREDICTED: beta-glucosidase 13-like [Jatropha curcas]
20 Hb_166813_010 0.1252069497 - - hypothetical protein JCGZ_24970 [Jatropha curcas]

Gene co-expression network

sample Hb_001901_010 Hb_001901_010 Hb_002999_090 Hb_002999_090 Hb_001901_010--Hb_002999_090 Hb_164162_020 Hb_164162_020 Hb_001901_010--Hb_164162_020 Hb_001971_070 Hb_001971_070 Hb_001901_010--Hb_001971_070 Hb_006153_200 Hb_006153_200 Hb_001901_010--Hb_006153_200 Hb_003462_150 Hb_003462_150 Hb_001901_010--Hb_003462_150 Hb_004544_080 Hb_004544_080 Hb_001901_010--Hb_004544_080 Hb_002999_090--Hb_003462_150 Hb_002556_020 Hb_002556_020 Hb_002999_090--Hb_002556_020 Hb_002999_090--Hb_004544_080 Hb_000141_230 Hb_000141_230 Hb_002999_090--Hb_000141_230 Hb_002475_020 Hb_002475_020 Hb_002999_090--Hb_002475_020 Hb_006538_070 Hb_006538_070 Hb_164162_020--Hb_006538_070 Hb_164162_020--Hb_001971_070 Hb_000948_070 Hb_000948_070 Hb_164162_020--Hb_000948_070 Hb_166813_010 Hb_166813_010 Hb_164162_020--Hb_166813_010 Hb_006538_050 Hb_006538_050 Hb_164162_020--Hb_006538_050 Hb_001971_070--Hb_004544_080 Hb_001971_070--Hb_003462_150 Hb_001971_070--Hb_006538_070 Hb_001971_070--Hb_002999_090 Hb_001195_440 Hb_001195_440 Hb_006153_200--Hb_001195_440 Hb_006153_200--Hb_002999_090 Hb_045992_010 Hb_045992_010 Hb_006153_200--Hb_045992_010 Hb_001218_020 Hb_001218_020 Hb_006153_200--Hb_001218_020 Hb_006153_200--Hb_003462_150 Hb_003462_150--Hb_004544_080 Hb_003462_150--Hb_000141_230 Hb_000608_080 Hb_000608_080 Hb_003462_150--Hb_000608_080 Hb_003462_150--Hb_002556_020 Hb_003462_150--Hb_002475_020 Hb_004544_080--Hb_000141_230 Hb_004544_080--Hb_000608_080 Hb_004544_080--Hb_002556_020 Hb_004544_080--Hb_002475_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.79078 0.0394269 2.39977 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 13.0198 0

CAGE analysis