Hb_045992_010

Information

Type -
Description -
Location Contig45992: 108-1815
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_045992_010 0.0 - - -
2 Hb_001901_010 0.0848521263 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
3 Hb_000005_270 0.0878206842 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
4 Hb_001218_020 0.0948713637 transcription factor TF Family: MYB hypothetical protein POPTR_0005s17080g [Populus trichocarpa]
5 Hb_006153_200 0.0963101517 - - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Theobroma cacao]
6 Hb_000120_440 0.1004544149 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002999_090 0.1032279664 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000301_030 0.1049756299 - - PREDICTED: pectate lyase-like [Jatropha curcas]
9 Hb_000120_710 0.1091315101 - - unnamed protein product [Vitis vinifera]
10 Hb_011283_010 0.1091441491 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
11 Hb_001165_040 0.1216179295 - - hypothetical protein POPTR_0009s10120g [Populus trichocarpa]
12 Hb_009545_040 0.1228587353 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003855_070 0.1231375526 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
14 Hb_001769_090 0.1240683916 - - PREDICTED: uncharacterized protein LOC105630842 [Jatropha curcas]
15 Hb_005356_010 0.1279068414 - - hypothetical protein POPTR_0003s16550g [Populus trichocarpa]
16 Hb_164162_020 0.1327253533 - - PREDICTED: uncharacterized protein LOC105646964 [Jatropha curcas]
17 Hb_006538_070 0.1334303429 - - hypothetical protein JCGZ_18339 [Jatropha curcas]
18 Hb_000513_110 0.1342824469 - - PREDICTED: germin-like protein subfamily 1 member 13 [Populus euphratica]
19 Hb_011671_380 0.1355921304 - - Blue copper protein precursor, putative [Ricinus communis]
20 Hb_000462_100 0.1379979946 - - Leucoanthocyanidin dioxygenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_045992_010 Hb_045992_010 Hb_001901_010 Hb_001901_010 Hb_045992_010--Hb_001901_010 Hb_000005_270 Hb_000005_270 Hb_045992_010--Hb_000005_270 Hb_001218_020 Hb_001218_020 Hb_045992_010--Hb_001218_020 Hb_006153_200 Hb_006153_200 Hb_045992_010--Hb_006153_200 Hb_000120_440 Hb_000120_440 Hb_045992_010--Hb_000120_440 Hb_002999_090 Hb_002999_090 Hb_045992_010--Hb_002999_090 Hb_001901_010--Hb_002999_090 Hb_164162_020 Hb_164162_020 Hb_001901_010--Hb_164162_020 Hb_001971_070 Hb_001971_070 Hb_001901_010--Hb_001971_070 Hb_001901_010--Hb_006153_200 Hb_003462_150 Hb_003462_150 Hb_001901_010--Hb_003462_150 Hb_004544_080 Hb_004544_080 Hb_001901_010--Hb_004544_080 Hb_000005_270--Hb_000120_440 Hb_000513_110 Hb_000513_110 Hb_000005_270--Hb_000513_110 Hb_000021_090 Hb_000021_090 Hb_000005_270--Hb_000021_090 Hb_000120_710 Hb_000120_710 Hb_000005_270--Hb_000120_710 Hb_009545_040 Hb_009545_040 Hb_000005_270--Hb_009545_040 Hb_001218_020--Hb_000120_710 Hb_003855_070 Hb_003855_070 Hb_001218_020--Hb_003855_070 Hb_001328_110 Hb_001328_110 Hb_001218_020--Hb_001328_110 Hb_006538_050 Hb_006538_050 Hb_001218_020--Hb_006538_050 Hb_000003_470 Hb_000003_470 Hb_001218_020--Hb_000003_470 Hb_001195_440 Hb_001195_440 Hb_006153_200--Hb_001195_440 Hb_006153_200--Hb_002999_090 Hb_006153_200--Hb_001218_020 Hb_006153_200--Hb_003462_150 Hb_000120_440--Hb_009545_040 Hb_000120_440--Hb_000021_090 Hb_001165_040 Hb_001165_040 Hb_000120_440--Hb_001165_040 Hb_004037_010 Hb_004037_010 Hb_000120_440--Hb_004037_010 Hb_000120_440--Hb_000513_110 Hb_002999_090--Hb_003462_150 Hb_002556_020 Hb_002556_020 Hb_002999_090--Hb_002556_020 Hb_002999_090--Hb_004544_080 Hb_000141_230 Hb_000141_230 Hb_002999_090--Hb_000141_230 Hb_002475_020 Hb_002475_020 Hb_002999_090--Hb_002475_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.362881 0 0.478676 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.12488 0

CAGE analysis