Hb_000920_220

Information

Type -
Description -
Location Contig920: 126590-127278
Sequence    

Annotation

kegg
ID rcu:RCOM_1452720
description hypothetical protein
nr
ID XP_012068642.1
description PREDICTED: uncharacterized protein LOC105631216 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L8T3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24518 PE=4 SV=1
Gene Ontology
ID GO:0000166
description disease resistance protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62414: 126607-127298
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000920_220 0.0 - - PREDICTED: uncharacterized protein LOC105631216 [Jatropha curcas]
2 Hb_005000_050 0.152842015 - - PREDICTED: tetraspanin-2 [Jatropha curcas]
3 Hb_164926_050 0.1537241544 - - PREDICTED: subtilisin-like protease SBT3.5 [Jatropha curcas]
4 Hb_004032_090 0.1579738452 - - PREDICTED: protein AIG1 [Jatropha curcas]
5 Hb_023386_050 0.1596176975 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001898_010 0.1613317648 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
7 Hb_002375_060 0.161504794 - - PREDICTED: uncharacterized protein LOC105628271 [Jatropha curcas]
8 Hb_178793_010 0.1615404678 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3 [Nelumbo nucifera]
9 Hb_000402_030 0.1627585518 - - PREDICTED: cysteine-rich receptor-like protein kinase 2 [Jatropha curcas]
10 Hb_004712_160 0.1668501834 - - hypothetical protein CICLE_v10024612mg [Citrus clementina]
11 Hb_172676_010 0.1674723286 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
12 Hb_005375_070 0.1758323554 transcription factor TF Family: MYB-related PREDICTED: protein LHY [Jatropha curcas]
13 Hb_000009_150 0.1758884342 - - carbohydrate transporter, putative [Ricinus communis]
14 Hb_003430_070 0.1760419848 - - PREDICTED: protein phosphatase 2C 37 [Jatropha curcas]
15 Hb_000366_050 0.1769161272 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
16 Hb_000009_300 0.1797846381 - - hypothetical protein CICLE_v10024731mg [Citrus clementina]
17 Hb_000329_790 0.1825841631 - - PREDICTED: uncharacterized protein LOC105643367 [Jatropha curcas]
18 Hb_000936_090 0.1836953805 - - PREDICTED: putative E3 ubiquitin-protein ligase RING1a isoform X2 [Jatropha curcas]
19 Hb_001951_240 0.1839378106 - - PREDICTED: protein MEI2-like 5 [Jatropha curcas]
20 Hb_001318_140 0.1842354639 - - PREDICTED: probable protein phosphatase 2C 49 [Jatropha curcas]

Gene co-expression network

sample Hb_000920_220 Hb_000920_220 Hb_005000_050 Hb_005000_050 Hb_000920_220--Hb_005000_050 Hb_164926_050 Hb_164926_050 Hb_000920_220--Hb_164926_050 Hb_004032_090 Hb_004032_090 Hb_000920_220--Hb_004032_090 Hb_023386_050 Hb_023386_050 Hb_000920_220--Hb_023386_050 Hb_001898_010 Hb_001898_010 Hb_000920_220--Hb_001898_010 Hb_002375_060 Hb_002375_060 Hb_000920_220--Hb_002375_060 Hb_005375_070 Hb_005375_070 Hb_005000_050--Hb_005375_070 Hb_149484_010 Hb_149484_010 Hb_005000_050--Hb_149484_010 Hb_001951_240 Hb_001951_240 Hb_005000_050--Hb_001951_240 Hb_005000_050--Hb_023386_050 Hb_007574_050 Hb_007574_050 Hb_005000_050--Hb_007574_050 Hb_004712_160 Hb_004712_160 Hb_005000_050--Hb_004712_160 Hb_033053_010 Hb_033053_010 Hb_164926_050--Hb_033053_010 Hb_000069_430 Hb_000069_430 Hb_164926_050--Hb_000069_430 Hb_002078_250 Hb_002078_250 Hb_164926_050--Hb_002078_250 Hb_164926_050--Hb_007574_050 Hb_164926_050--Hb_005000_050 Hb_002235_370 Hb_002235_370 Hb_164926_050--Hb_002235_370 Hb_000008_430 Hb_000008_430 Hb_004032_090--Hb_000008_430 Hb_002343_020 Hb_002343_020 Hb_004032_090--Hb_002343_020 Hb_001123_190 Hb_001123_190 Hb_004032_090--Hb_001123_190 Hb_000009_150 Hb_000009_150 Hb_004032_090--Hb_000009_150 Hb_048476_040 Hb_048476_040 Hb_004032_090--Hb_048476_040 Hb_006052_060 Hb_006052_060 Hb_004032_090--Hb_006052_060 Hb_001123_170 Hb_001123_170 Hb_023386_050--Hb_001123_170 Hb_000100_210 Hb_000100_210 Hb_023386_050--Hb_000100_210 Hb_023386_050--Hb_002375_060 Hb_003656_170 Hb_003656_170 Hb_023386_050--Hb_003656_170 Hb_002324_050 Hb_002324_050 Hb_023386_050--Hb_002324_050 Hb_001898_010--Hb_005375_070 Hb_000402_030 Hb_000402_030 Hb_001898_010--Hb_000402_030 Hb_001898_010--Hb_004712_160 Hb_001898_010--Hb_007574_050 Hb_098160_010 Hb_098160_010 Hb_001898_010--Hb_098160_010 Hb_009476_110 Hb_009476_110 Hb_001898_010--Hb_009476_110 Hb_000366_050 Hb_000366_050 Hb_002375_060--Hb_000366_050 Hb_002375_060--Hb_164926_050 Hb_029576_010 Hb_029576_010 Hb_002375_060--Hb_029576_010 Hb_000836_320 Hb_000836_320 Hb_002375_060--Hb_000836_320 Hb_008021_010 Hb_008021_010 Hb_002375_060--Hb_008021_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.63365 1.6441 1.46832 0.0875351 0.400865
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.201951 0.158716 0 0.911244 0.767883

CAGE analysis