Hb_000742_150

Information

Type -
Description -
Location Contig742: 125833-134630
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000742_150 0.0 - - -
2 Hb_003915_040 0.2454960299 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At2g30600 isoform X1 [Jatropha curcas]
3 Hb_132317_010 0.3047128989 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
4 Hb_000703_300 0.315759262 - - -
5 Hb_007193_050 0.3191609063 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
6 Hb_032705_020 0.3221495728 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
7 Hb_070758_010 0.3252731413 - - -
8 Hb_182831_010 0.3264536509 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
9 Hb_014548_030 0.3291087118 - - PREDICTED: uncharacterized protein LOC104897580 [Beta vulgaris subsp. vulgaris]
10 Hb_033286_020 0.3317631301 - - -
11 Hb_011574_010 0.3334088786 - - -
12 Hb_000236_450 0.3361313536 - - coated vesicle membrane protein, putative [Ricinus communis]
13 Hb_000612_050 0.3436493715 - - hypothetical protein MIMGU_mgv1a020753mg, partial [Erythranthe guttata]
14 Hb_133047_030 0.3436702517 - - nuclear acid binding protein, putative [Ricinus communis]
15 Hb_148593_010 0.3443350024 - - PREDICTED: serine/threonine-protein kinase ATR-like [Jatropha curcas]
16 Hb_027380_250 0.3471186551 - - Isoflavone reductase, putative [Ricinus communis]
17 Hb_166631_010 0.3474056363 - - PREDICTED: uncharacterized protein LOC105801076 [Gossypium raimondii]
18 Hb_008008_020 0.3521990427 - - -
19 Hb_006674_020 0.3527055418 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
20 Hb_001366_160 0.3556970034 - - -

Gene co-expression network

sample Hb_000742_150 Hb_000742_150 Hb_003915_040 Hb_003915_040 Hb_000742_150--Hb_003915_040 Hb_132317_010 Hb_132317_010 Hb_000742_150--Hb_132317_010 Hb_000703_300 Hb_000703_300 Hb_000742_150--Hb_000703_300 Hb_007193_050 Hb_007193_050 Hb_000742_150--Hb_007193_050 Hb_032705_020 Hb_032705_020 Hb_000742_150--Hb_032705_020 Hb_070758_010 Hb_070758_010 Hb_000742_150--Hb_070758_010 Hb_003915_040--Hb_032705_020 Hb_000148_010 Hb_000148_010 Hb_003915_040--Hb_000148_010 Hb_007083_040 Hb_007083_040 Hb_003915_040--Hb_007083_040 Hb_004994_370 Hb_004994_370 Hb_003915_040--Hb_004994_370 Hb_145157_010 Hb_145157_010 Hb_003915_040--Hb_145157_010 Hb_133047_030 Hb_133047_030 Hb_132317_010--Hb_133047_030 Hb_132317_010--Hb_007193_050 Hb_000346_080 Hb_000346_080 Hb_132317_010--Hb_000346_080 Hb_024468_040 Hb_024468_040 Hb_132317_010--Hb_024468_040 Hb_027380_250 Hb_027380_250 Hb_132317_010--Hb_027380_250 Hb_012538_010 Hb_012538_010 Hb_132317_010--Hb_012538_010 Hb_003038_150 Hb_003038_150 Hb_000703_300--Hb_003038_150 Hb_001766_040 Hb_001766_040 Hb_000703_300--Hb_001766_040 Hb_001488_260 Hb_001488_260 Hb_000703_300--Hb_001488_260 Hb_001366_160 Hb_001366_160 Hb_000703_300--Hb_001366_160 Hb_000078_170 Hb_000078_170 Hb_000703_300--Hb_000078_170 Hb_000330_080 Hb_000330_080 Hb_000703_300--Hb_000330_080 Hb_007193_050--Hb_027380_250 Hb_118014_010 Hb_118014_010 Hb_007193_050--Hb_118014_010 Hb_000045_060 Hb_000045_060 Hb_007193_050--Hb_000045_060 Hb_007193_050--Hb_024468_040 Hb_007193_050--Hb_133047_030 Hb_032705_020--Hb_145157_010 Hb_004289_040 Hb_004289_040 Hb_032705_020--Hb_004289_040 Hb_182831_010 Hb_182831_010 Hb_032705_020--Hb_182831_010 Hb_028751_020 Hb_028751_020 Hb_032705_020--Hb_028751_020 Hb_001496_140 Hb_001496_140 Hb_032705_020--Hb_001496_140 Hb_004920_010 Hb_004920_010 Hb_070758_010--Hb_004920_010 Hb_001009_100 Hb_001009_100 Hb_070758_010--Hb_001009_100 Hb_003206_020 Hb_003206_020 Hb_070758_010--Hb_003206_020 Hb_001098_050 Hb_001098_050 Hb_070758_010--Hb_001098_050 Hb_000236_090 Hb_000236_090 Hb_070758_010--Hb_000236_090 Hb_143489_020 Hb_143489_020 Hb_070758_010--Hb_143489_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0170066 0 0 0.0385685 0.0189596
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0184213 0 0.0219935 0.0777848

CAGE analysis